Francisella tularensis subsp. tularensis SCHU S4: FTT_0478c
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Entry
FTT_0478c CDS
T00214
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ftu
Francisella tularensis subsp. tularensis SCHU S4
Pathway
ftu03410
Base excision repair
ftu03430
Mismatch repair
ftu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ftu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FTT_0478c (recJ)
03430 Mismatch repair
FTT_0478c (recJ)
03440 Homologous recombination
FTT_0478c (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ftu03400
]
FTT_0478c (recJ)
DNA repair and recombination proteins [BR:
ftu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FTT_0478c (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FTT_0478c (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FTT_0478c (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
CAG45111
UniProt:
Q5NHH6
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All DBs
Position
complement(495459..497201)
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AA seq
580 aa
AA seq
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MLIKQKKIDNNIFSTLLAKGYDSFTAKIISARVRKIENLELILNGSIKDLSSPFLFKDIE
KAVERLYKALQNNEIIGLETDHDCDGQTSHAILYEALTKIFGHPKEKIRSYIGHRLQEGY
GLSESLMNRILTDKIRPSLIITADNGSTDEPRIAILKKNGIDTIITDHHAIPPEGTPKSA
IAVLNPTQQGCNYPDKAIAGCMVAWLFMAALRRKYLQNNKMISQSYGLSNLLDFVAIGTV
ADCVSMATSHNNRIVTKFGIEQLKNNQRLCWDFVDKDKLSSEYIGFNIAPILNSDGRVSD
ALGSVSFLLEEDEHKIEDIFDNLKQQNNQRKEIQKKLTQEAIVQAYQLNQQKNSLCILLE
DGHSGIHGISASRIKEMFGKAVIIFSQTQHDSTLISGSARSIDNIHIKTILDNIAVKEPQ
LIIKYGGHKGAAGLTIKKSDFDKLYQLFESEITDIITKQNIILEPIIEYDFELDEHHFEL
ETLDKIDALEPFGRKFEKPLFCNQFMLENLRLVGKDKNHAQLVLRYKNISSIKAIWFNAT
DNKILEQLIIGDCIKACYELQKEEFLGQINLSLNIKTIEK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgctaatcaaacaaaaaaaaattgataacaatatctttagtactctactagctaaaggc
tatgattcttttacagcaaaaataatctctgctagagtacgtaaaatagaaaaccttgag
ctgattttaaatggttcaatcaaggatctgtcatcaccatttttattcaaagatattgaa
aaagctgtagaaagactttataaagcattacaaaataatgaaattattggattagaaact
gatcatgactgtgacggtcagacttcacacgcgattttgtatgaagctttaactaaaata
tttggtcaccctaaagaaaaaatccgctcatatattggccatagactgcaagaaggctat
ggtttatcagagtccctaatgaatagaattcttacagataaaataaggccaagcctaata
ataacagctgataatggttctacagacgagccgaggattgcaatccttaaaaaaaatggt
attgatacaattataactgatcatcatgctatcccacctgaaggcactcctaaaagtgct
attgccgtacttaatccaactcaacaaggctgtaactatccagataaagctatcgctggc
tgtatggttgcttggctttttatggcagcactgcgcagaaagtatctgcaaaacaacaaa
atgatatcgcaatcatatggcttaagcaatctgttagattttgtcgctattggcacagtt
gctgattgcgtaagtatggcaactagtcataataatcgtattgtgacaaaatttggtatc
gagcaattaaaaaataatcaacgcttatgctgggactttgtagataaagataaactgtca
agtgaatacattggttttaatattgcgccaattctaaatagtgatggtagagtttctgat
gctttaggttctgttagctttttactagaagaagatgagcacaagatagaagatatcttt
gataatctcaaacaacaaaacaaccagcgtaaagaaatccaaaaaaaacttactcaagaa
gctatagttcaagcgtatcagctaaatcagcaaaaaaactcattatgtatccttttagag
gatggtcattctggaattcatgggatatcagcaagtagaattaaggaaatgtttggcaaa
gcagtaattatcttctcgcaaacgcagcatgattcaactctaatatctggatccgcacga
agcatagacaatattcatatcaaaactatcctagataatatagctgttaaagaaccacaa
ctaatcatcaaatatggtggccataaaggtgccgcaggtttaacgataaaaaaatctgat
tttgataaattatatcaattatttgaaagtgaaataactgacattatcactaaacaaaat
ataattctcgagcctataatagaatatgattttgagcttgatgagcatcactttgaatta
gagacgttagataaaatagatgctctagaaccctttggtagaaaatttgaaaaaccttta
ttttgtaatcaatttatgcttgaaaatttacgcttagttggtaaagataaaaatcatgct
cagctagtattacgctataaaaatatatcctcaatcaaagcaatatggtttaacgctacg
gataataaaatactagaacagctaattatcggcgactgtataaaagcctgctatgagtta
caaaaagaagaattcttaggacaaataaacctatcacttaatattaaaactatcgaaaaa
tga
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