Francisella tularensis subsp. holarctica VT68: CH67_1928
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Entry
CH67_1928 CDS
T03714
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ftv
Francisella tularensis subsp. holarctica VT68
Brite
KEGG Orthology (KO) [BR:
ftv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ftv03009
]
CH67_1928 (rumA)
Enzymes [BR:
ftv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CH67_1928 (rumA)
Ribosome biogenesis [BR:
ftv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CH67_1928 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
RrnaAD
Methyltransf_25
TRM5-TYW2_MTfase
MTS
Methyltransf_11
Ubie_methyltran
Methyltransf_4
PCMT
Cons_hypoth95
Methyltransf_15
Methyltransf_12
N6_N4_Mtase
Methyltransf_23
DOT1
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
AJI66017
UniProt:
A0A0B6D1X9
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All DBs
Position
complement(1683956..1685305)
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AA seq
449 aa
AA seq
DB search
MGRSRYHNKLKEGIFEAEITALSHDGRGIAKVDGKTTFIPFTLPGEVVKFEYTFTKAKFD
EAKVVEYVKKSLNRVNPPCDHFQICGGCSLQHMSTDAQIEHKQQTLINQLKYIGNGVEPE
NILPPLRTSNTEGYRNKARLGVRYVSKKGKILVGFRERNGRFLADIDKCIVLNPLVGDKI
TEISSFIETLSIYQHIAQLEIAIDDTRPAMIVRHLEPFTNEDLEKLRSFAQENNYWIYLQ
SKGPDTIFRLYPQGDVEPKKLSYQPAAGIDIGFEPNDFTQVNNDINKKMIKRAIELLDIS
ENDSIIDLFCGLGNFTLPISQHAKTVIGVEGEPTMVKRAKETADNNNITNVNFYAANLFE
SFEDKEWFNNFEYNKMLLDPPRAGAQEVCNNIEKFNVKRIVYVSCDTAALARDAGILVNT
KGYKLISAGVMDMFPHTMHVESIAVFEKI
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggaagatctagatatcataataagctaaaagagggaatctttgaggctgaaattaca
gcattaagtcatgatggtagaggtattgcaaaagttgatggtaaaactacttttatacct
ttcacattacctggcgaagtagttaaatttgaatatacattcacaaaagcaaaattcgat
gaagcaaaagtagttgagtatgttaaaaaatcattaaatagagttaatccgccttgtgac
cattttcaaatatgtggaggttgtagcttacaacatatgtctacagatgcacagatcgag
cataagcaacaaactttaattaatcaattaaaatatattggtaatggtgttgagccagag
aatattttaccaccactacgcacgagtaatactgaaggatatcgtaataaagcacgtttg
ggtgttaggtatgtcagtaaaaaaggtaaaattcttgttggctttagagagcgtaatggt
aggttcttggcagatatagataagtgtatcgttttaaatccccttgtcggtgacaaaata
acagaaatatcttcatttatagagacgttatctatatatcaacatatagcacaattagaa
atagcaatagatgatacaagacctgctatgattgtgcgtcatctagaaccatttacaaat
gaagacttagaaaagctaagatcatttgcacaagaaaataattattggatatatttacaa
tcaaaaggtccagatactatttttagattatacccacaaggtgatgtagagcctaaaaag
ctaagctatcagcctgctgctggaatagatattggttttgaacctaatgattttactcag
gttaataatgatatcaataaaaaaatgattaaaagagcgattgagcttttagatatatca
gaaaatgattctattattgacttattctgtggtttaggtaactttacgctgccaatttct
cagcatgcaaaaactgtaattggcgttgagggtgagccaacaatggtcaaaagagccaaa
gaaactgctgataataataacataacaaatgttaatttttatgcggcaaatctttttgag
agttttgaggataaagagtggtttaataattttgaatataacaagatgcttttagatccg
cctcgagcaggcgcacaagaagtttgtaacaatattgaaaaatttaatgttaagcgcata
gtttatgtttcatgtgatactgctgctttagcacgtgatgctggaattttggtcaatacc
aaaggttataaactaataagtgctggtgtaatggatatgttccctcatacaatgcatgtt
gagtcaatagctgtttttgagaagatctag
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