Francisella tularensis subsp. holarctica VT68: CH67_1985
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Entry
CH67_1985 CDS
T03714
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ftv
Francisella tularensis subsp. holarctica VT68
Pathway
ftv03410
Base excision repair
ftv03430
Mismatch repair
ftv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ftv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CH67_1985 (recJ)
03430 Mismatch repair
CH67_1985 (recJ)
03440 Homologous recombination
CH67_1985 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ftv03400
]
CH67_1985 (recJ)
DNA repair and recombination proteins [BR:
ftv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CH67_1985 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CH67_1985 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CH67_1985 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
DUF7222
Motif
Other DBs
NCBI-ProteinID:
AJI64147
UniProt:
A0A0B6CY43
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All DBs
Position
1735700..1737442
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AA seq
580 aa
AA seq
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MLIKQKKIDNNIFSTLLAKGYDSFTAKIISARVRKIENLELILNGSIKDLSSPFLFKDIE
KAVERLYQAVQNNEIIGLETDHDCDGQTSHAILYEALTKIFGHPKEKIRSYIGHRLQEGY
GLSESLMNRILTDKIRPSLIITADNGSTDEPRIAILKKNGIDTIITDHHAIPPEGTPKSA
IAVLNPTQQGCNYPDKAIAGCMVAWLFMAALRRKYLQNNKMISQSYGLSNLLDFVAIGTV
ADCVSMATSHNNRIVTKFGIEQLKNNQRLCWDFVDKDKLSSEYIGFSIAPILNSDGRVSD
ALGSVSFLLEEDEHKIEDIFDNLKQQNNQRKEIQKKLTQEAIVQAYQLNQQKNSLCILLE
DGHSGIHGISASRIKEMFGKAVIIFSQTQHDSTLISGSARSIDNIHIKTILDNIAVKEPQ
LIIKYGGHKGAAGLTIKKSDFDKFYQLFESEITDIITKQNIILEPIIEYDFELDEHHFEL
ETLDKIDALEPFGREFEKPLFCNQFMLENLRLVGKDKNHAQLVLRYKNISSIKAIWFNAT
DNKILEQLIIGDCIKACYELQKEEFLGQINLSLNIKTIEK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgctaatcaaacaaaaaaaaattgataacaatatctttagtactctactagctaaaggc
tatgattcttttacagcaaaaataatctctgctagagtacgtaaaatagaaaaccttgag
ctgattttaaatggttcaatcaaggatctatcatcaccatttttattcaaagatattgaa
aaagctgtagaaagactttatcaagcagtacaaaataatgaaattattggattagaaact
gatcatgactgtgacggtcagacttcacacgcgattttgtatgaagctttaactaaaata
tttggtcaccctaaagaaaaaatccgctcatatattggccatagactgcaagaaggctat
ggtttatcagagtccctaatgaatagaattcttacagataaaataaggccaagcctaata
ataacagctgataatggttctacagacgagccgaggattgcaatccttaaaaaaaatggt
attgatacaattataactgatcatcatgctatcccacctgaaggcactcctaaaagtgct
attgccgtacttaatccaactcaacaaggctgtaactatccagataaagctatcgctggc
tgtatggttgcttggctttttatggcagcactgcgcagaaagtatctgcaaaacaacaaa
atgatatcgcaatcatatggtttaagcaatctgttagattttgtcgctattggcacagtt
gctgattgcgtaagtatggcaactagtcataataatcgtattgtgacaaaatttggtatc
gagcaattaaaaaataatcaacgcttatgctgggactttgtagataaagataaactgtca
agtgaatacattggttttagtattgcgccaattctaaatagtgatggtagagtttctgat
gctttaggttctgttagctttttactagaagaagatgagcacaagatagaagatatcttt
gataatctcaaacaacaaaacaaccagcgtaaagaaatccaaaaaaaacttactcaagaa
gctatagttcaagcgtatcagctaaatcagcaaaaaaactcattatgtatccttttagag
gatggtcattctggaattcatgggatatcagcaagtagaattaaggaaatgtttggcaaa
gcagtaattatcttctcgcaaacgcagcatgattcaactctaatatctggatccgcacga
agcatagacaatattcatatcaaaactatcctagataatatagctgttaaagaaccacaa
ctaatcatcaaatatggtggccataaaggtgccgcaggtttaacgataaaaaaatctgat
tttgataaattctatcaattatttgaaagtgaaataactgacattatcactaaacaaaat
ataattcttgagcctataatagaatatgattttgagcttgatgagcatcactttgaatta
gagacgttagataaaatagatgctctagaaccctttggtagagaatttgaaaaaccttta
ttttgtaatcaatttatgcttgaaaatttacgcttagttggtaaagataaaaatcatgct
cagctagtattacgctataaaaatatatcctcaatcaaagcaatatggtttaacgctacg
gataataaaatactagaacagctaattatcggcgactgtataaaagcctgctatgagtta
caaaaagaagaattcttaggacaaataaacctatcacttaatattaaaactatcgaaaaa
tga
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