Francisella tularensis subsp. holarctica VT68: CH67_404
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Entry
CH67_404 CDS
T03714
Name
(GenBank) RNB domain protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ftv
Francisella tularensis subsp. holarctica VT68
Brite
KEGG Orthology (KO) [BR:
ftv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ftv03016
]
CH67_404
Enzymes [BR:
ftv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CH67_404
Transfer RNA biogenesis [BR:
ftv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CH67_404
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
Motif
Other DBs
NCBI-ProteinID:
AJI64801
UniProt:
A0A0B6E1S8
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Position
369256..371106
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AA seq
616 aa
AA seq
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MQKNSLVIFKSKPAKVINLLDKKIEIETLDGKNIKLPAKSVQLLVESEKYFELESLKELE
IAELEMTWELLQEQQQTSVEELCELLFESIGVNQAYTVWLLVSEGEYFSFNDDFSINIHS
QEQKNAIVRDKQEKLKKEQELNDFIERLNNKTFNEDDRKFLKEIEALATLKTNKCRFFKY
LNMEESENSAYKLLLDIGYCDEFFNPYLYRYGAELEHNSAEFNYNSKSDNQRVDLTHLKA
YAIDDEGSNDPDDAISWDSQKNKMWVHISDPSSSISFGDEVDLQARARGSNLYVPEQIVM
MLPPQATAKLGLGLQEVSPAVSVGFRIDEQGDIHDIEICFSNIKVTRYSYEFVEENMHTL
ELGDIVSYAKYFTDKRLSKGAVELDFPEIKISLDANKNVKLTDLPRLNSRTLVRDTMLMA
GVAVGQFCIKNNISVSFSTQPEHDLGQDGLENIDSIADMFATRKKLQRGRYSTQPSMHAG
MGLEAYVQVTSPLRRYLDLIVHYQLRNFLQHKEMISAQEIDNIIAQVDIPIKSNRQTERF
SNSHWKLVYLIQNPDLEFQATVIEKLEKSRLMVSIAALAMTKKLSVSGKYDLNDQIKLQN
TSVNLVTQEAFFRVIE
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaattctctagtaatatttaaatctaaaccagcaaaggttattaatctctta
gataaaaaaattgagattgagactctcgatggtaaaaatattaagttacccgcaaagagt
gttcaattacttgtagagtcagaaaagtattttgaacttgaaagtttaaaagagctagaa
atagctgaacttgaaatgacttgggaattattacaagagcaacaacaaacatctgttgaa
gaactatgtgagttactttttgaatctataggggtaaatcaggcttataccgtgtggctt
ttagtttcagaaggagagtattttagctttaatgatgattttagtatcaatattcattca
caagagcaaaaaaatgcaatagttagagacaaacaagagaaacttaaaaaagagcaagaa
cttaatgatttcatagagcgtttaaacaataaaacttttaatgaagatgataggaaattt
cttaaggaaatagaagctctagcaacacttaaaactaataagtgtcgtttttttaagtac
ttaaacatggaggagtctgagaatagtgcgtataaattgcttttggatattggctattgt
gatgagttttttaacccttatttatacaggtatggtgctgagttagaacataattctgca
gagtttaactacaattctaaatcagataaccagcgagtagatctgacacatttaaaggct
tatgctatagatgatgaaggtagtaatgatcctgatgatgcaattagttgggatagccaa
aaaaataaaatgtgggtacatatctcagatccttcttctagtattagttttggtgatgag
gttgatcttcaagctagagcacgaggctcaaatttatatgtgccggaacagatagtcatg
atgttacctcctcaagcaacagcaaaattaggcttaggcttacaggaggtatctcctgca
gtatctgtaggatttaggattgatgagcaaggtgatatccatgatattgaaatatgcttt
agtaatataaaagttacacgatattcttatgaatttgttgaagaaaatatgcatacttta
gagcttggcgatatagtaagttatgcaaaatatttcactgataagcgtttatctaaaggt
gcagttgagcttgatttcccagagataaagatatcattagatgctaataaaaatgttaaa
ttaactgatttaccacgtttaaactcaaggacacttgtacgagatacaatgctaatggct
ggtgttgcagtaggacagttttgtattaaaaataatattagtgtatccttttctacacag
cctgaacatgatcttggacaagatggtttagagaatatcgattcaatagctgatatgttt
gcaacacgcaaaaaactccaaagaggcagatattctacacaacctagtatgcatgcaggg
atgggattagaagcctatgtacaagtgactagtccattgagaagataccttgatttgatt
gtacactatcagttacgtaattttctgcagcataaagagatgataagtgctcaagagatt
gataacataattgctcaagttgatattcctataaaatcaaatagacaaactgagcgtttc
tcaaattcacactggaagttggtttacctaatccaaaatcctgacctggaatttcaagcg
acagttattgagaaattagaaaaaagtagattaatggtttctattgcagctttagcgatg
actaaaaaactttctgtcagcggtaagtatgatttaaatgatcaaataaagttacaaaac
acctcagtaaaccttgttacacaagaggctttctttagagttattgaataa
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