Francisella tularensis subsp. holarctica VT68: CH67_990
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Entry
CH67_990 CDS
T03714
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ftv
Francisella tularensis subsp. holarctica VT68
Pathway
ftv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ftv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CH67_990 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ftv03400
]
CH67_990 (recD)
Enzymes [BR:
ftv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CH67_990 (recD)
DNA repair and recombination proteins [BR:
ftv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CH67_990 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
AAA_11
UvrD_C_2
UvrD-helicase
Helicase_RecD
SLFN-g3_helicase
AAA_22
DEAD
SH3_13
UvrD_C
ResIII
NACHT
nSTAND3
PhoH
Flavi_DEAD
AAA_12
T2SSE
TIP49
NTPase_1
SRP54
TrwB_AAD_bind
AAA_28
Terminase_6N
AAA_33
FtsK_SpoIIIE
AAA_16
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AJI65648
UniProt:
A0A0B6E6P7
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All DBs
Position
884363..886204
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AA seq
613 aa
AA seq
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MYKTFHKACEQLADIRAIDFFFAKEVFDLVKKTTPSMTTLSSESYPPFHGAKGNDLEQKS
NEILFHILMKLMHVYSHGHSCLKIADISNKTIFASEQSNQSDAKVGFKMPSSDKIASILD
NLNYDNLPIYFAKQYDSLYIKRLWNYENEIANFIKLKTIQNTQKDNRIEEVVDKLFEPAG
EINWQKQAVIKSLNYNFSIISGGPGTGKTTTVAKLLLAIQMLNQNQQRIALLAPTGKAAQ
RMTESLKNTLATVIPSSLTTESTIQKNDIFKQVQDELNSVAQYLNNLEAQTIHRFLGLRP
NSTYVKYNQQSKAPFDVIIVDEASMLDMNIFIKLIRAVADNTKLILIGDTNQLPSVEAGS
LLANFTHDKYGSITPYTTLLIKNYRSQQYINNLAASVLKGDVNIDSQQNENIKFHSLRNL
DIYLREYAKRYSQLEKCRDYKEALTELNKFRILVANKNLEIGTDKLNQKIEKFMSKPIDS
NYKGKPIMITQNSYSLGLFNGDVGIMWPDDTGKLRAYFDGKDAKAFSLNMLPKYESVYAM
TIHKTQGSEFDEIVIILPAEDNEALSKQLLYTAITRAKYKLTIISEQSSLRDIAQKDIKR
NSNISELVSLSTQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaactttccataaagcttgtgagcaattagcagatattagagccatagatttt
ttctttgctaaagaggtgtttgatttagtcaaaaagactactccgtctatgaccacttta
tcaagtgagtcatatccaccctttcacggagcaaaggggaatgatttggaacaaaaaagt
aatgaaattttatttcatattttgatgaagcttatgcatgtgtatagtcatggtcatagc
tgtttgaagatagcagatatatcaaataaaactatttttgcttcagagcaaagtaatcag
agtgatgctaaagtaggctttaaaatgccaagctctgataaaattgcaagtattttagat
aacttaaattacgataatttacctatatattttgccaaacagtatgattctttgtatatt
aaaagattgtggaattatgagaatgaaatagctaactttataaaattaaaaacaatccaa
aatactcaaaaagacaatcgtattgaagaagttgtagacaaactatttgaacctgctggt
gaaatcaactggcaaaaacaggcggttatcaaaagtctaaattataattttagtattatc
tcaggtggacctggtacaggtaagacaactacagtcgcaaagcttttacttgctatacaa
atgcttaatcaaaatcagcaaagaatagcgcttttagcaccaactggtaaggctgctcag
agaatgacagagtcattaaaaaatactctagcaactgtcattccgtcaagcttgaccaca
gaatctactatacaaaaaaatgatatctttaaacaagttcaggatgaacttaatagtgtt
gctcagtatcttaataatctagaagcacaaactatacatagatttttaggcttaagacca
aactctacttatgttaaatataaccaacaatctaaagctccattcgatgttattattgtt
gatgaagcttcgatgcttgatatgaatatttttatcaagttaattagagctgtagcagat
aatactaagttgatattaataggtgatactaatcagttaccatctgttgaggctgggagt
cttttagcaaactttacacatgataaatatggtagcattacgccatatacaacattactt
atcaaaaactatcgttcacaacaatatataaataatcttgcagcctcagtcctaaaaggc
gatgttaatattgatagtcaacaaaatgaaaatattaaatttcatagtctaagaaattta
gatatttatttaagagagtatgcaaagagatattcacagcttgaaaagtgccgtgactac
aaagaggctcttacagagctgaataaatttagaatacttgtggctaacaaaaacctagaa
attggtacagataagttaaatcagaaaattgagaagtttatgtctaagcctatagattct
aactataagggtaaaccaattatgataactcaaaatagttattcattagggttatttaat
ggagatgtagggattatgtggcctgatgatactggtaagctccgagcatattttgatggt
aaagatgctaaggcatttagtctaaatatgctaccaaaatatgaaagtgtttatgcgatg
acaattcataaaactcaaggctcagagtttgatgaaatcgtgattattcttccagcagaa
gataatgaagcgctaagtaaacaacttttgtatacagctattactagagcaaaatataaa
ttaacgattatatctgaacaaagtagcttaagagatattgctcagaaagatattaagaga
aattcaaatatcagtgaattagttagcttgagcactcaataa
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