Francisella tularensis subsp. tularensis WY96-3418: FTW_0451
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Entry
FTW_0451 CDS
T00495
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ftw
Francisella tularensis subsp. tularensis WY96-3418
Pathway
ftw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ftw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FTW_0451 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ftw03021
]
FTW_0451 (rho)
03019 Messenger RNA biogenesis [BR:
ftw03019
]
FTW_0451 (rho)
Transcription machinery [BR:
ftw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FTW_0451 (rho)
Messenger RNA biogenesis [BR:
ftw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FTW_0451 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
NACHT
AAA
ResIII
S1CSD-TOTE-2
AAA_22
DUF3086
Motif
Other DBs
NCBI-ProteinID:
ABO46373
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All DBs
Position
442768..444030
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AA seq
420 aa
AA seq
DB search
MNLNELKYKSVNELMDIVQSLDLESLRARKQELIFSILKYHADKGEDIYGEGILEVLQDG
YGFLRSSDSSYFASPDDIYVSPAFIRKLNLRTGDSIVGKIRPPRENEKYFAVKHIDSVNF
DSPELARKKILFENLTPEYAKERLTMEIGNGSNEDITARVIDLAAPFGKGQRGLIVAPPK
TGKTIMMQNIATSIAKNHPECNLIMLLIDERPEEVTEMQRSVRGEVVASTFDEPAARHVQ
LAEIVIEKAKRLVEHKQDVVILLDSITRLARAYNTVSPASGRVLSGGVEANALQKPKRFF
GAARNTAEGGSLTIIATALVETGSKMDEVIFEEFKGTGNMELHLDRKIAERRVFPAISFD
RSGTRREELLTTPEELQKLWVLRKILGGMEDVQAMEFLTEKMKGSLTNEEFFETMKRGAI
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaaatgaattaaagtataaatctgttaatgagctaatggatatagttcaaagt
ctagatcttgagtcacttcgtgccagaaaacaagagctgatcttctcaattctaaagtac
cacgctgataaaggtgaagacatttatggtgaaggtattttagaagtcctacaagatggc
tatggctttctaagatcttctgatagctcgtacttcgcctctccagatgatatctatgtt
tcacctgcttttattagaaaactaaatctgcgtactggtgatagtattgtcggtaagatt
cgtccgcctcgtgaaaatgagaaatactttgctgtcaaacacatcgatagtgttaacttt
gattctccagaattagctagaaagaaaattttatttgagaacctgactcctgagtatgct
aaagaaaggctaactatggaaattggaaacggctcaaatgaggatattactgctagagtt
atagatttagcggcaccatttggtaaaggtcagcgtggcttgattgttgcaccacctaaa
actggtaagacaatcatgatgcaaaatatcgcaacgtctattgccaaaaatcatccagag
tgtaatctaatcatgctactaattgatgagcgtcctgaggaagttaccgaaatgcaacgc
tccgtgcgaggtgaggtagttgcatctacgtttgatgaaccagctgcacgccatgtccaa
ttagctgaaattgtaatcgaaaaagccaaaagattagttgagcacaaacaagatgtagta
atcttacttgactcaatcacaagactagctcgtgcatacaataccgtatctccagcgtct
ggtcgtgtactatctggtggtgtagaggcaaacgccttacaaaaaccaaaaagattcttt
ggtgctgcgcgtaatactgccgaaggtggtagcttgacaatcattgcaactgctcttgtc
gaaactggttcaaagatggatgaagttatctttgaagaattcaaaggtacaggtaacatg
gagcttcatcttgatcgtaagattgctgagcgccgcgtcttccctgctattagctttgat
agatctggtacacgtagagaagaactacttactactccagaagagctacaaaaactttgg
gtgctgcgtaagattcttggtggtatggaagatgtccaagctatggaattcttaacagag
aaaatgaaaggctcactaactaatgaagaattctttgaaactatgaaaagaggcgctatt
tag
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