Francisella tularensis subsp. novicida U112: AW25_1244
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Entry
AW25_1244 CDS
T03874
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ftx
Francisella tularensis subsp. novicida U112
Pathway
ftx03420
Nucleotide excision repair
ftx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ftx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AW25_1244
03430 Mismatch repair
AW25_1244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ftx03400
]
AW25_1244
Enzymes [BR:
ftx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AW25_1244
DNA repair and recombination proteins [BR:
ftx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AW25_1244
MMR (mismatch excision repair)
Other MMR factors
AW25_1244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DEAD
AAA_12
PhoH
AAA_30
AAA_11
ABC_toxin_N
Motif
Other DBs
NCBI-ProteinID:
AJI60650
UniProt:
A0Q602
LinkDB
All DBs
Position
complement(1296621..1298687)
Genome browser
AA seq
688 aa
AA seq
DB search
MQYTAEQQKIINHDIAKHALVSAVAGSGKTQTLIARIEYLISNQVAPNKILVLMYNKSAQ
LDFATRLKKVLNPEIAKLVNVRTMHSLGNSFLQAFAKAGFVKADKILKEYEVDAIIAKLL
KTYQKEFNITKDIDNERIETFKNYISLLKSDLSLDNSKLKELNSKEKKLLDKIFSQFNQE
CKNQKAITYDDMIYLPAKLFEKDKNSVTQVSSLYSHIIIDEYQDINQVQQFLLRCLVGRN
TYVMAVGDVDQTIYQWRGSTPYYMLEGFKKDFKGVQQYTLSYTFRYGDLISLMANNIIVN
NKKRHNNLCITYPKLNKATDISILDSSDKVVLKLKALIQNGVDASDIAILVRKYNSTTVF
ELSCLYHDLAYSVVADKNIFSENLFKAIYGYLMLFNKGYGFDKHTLEQRVEFIKAMLDYP
SLYLKKDLKQKLASQIASDISQAANCIAALRETVDKAFKQKNILAISNSWRNIFNNVRIK
KADKAIDFILQSLDLEKQISKVSGETHSSKSKLQIIEGMVSFAKGKKNTLIEFIELLYQL
YTRSNQQNQSNPNQIQIMSMHRAKGLEWDYVVVHDATEGGFFGDKNTKVDDEIIEEERRL
FYVAITRVKKHLFIVSSDDITRLSSWYQIRKNTYPRDLKCKNSLRFLYEGNLVECENYLD
KSNYHEDTKKLDNIIFKRYHDKITTEVD
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatacagccgaacagcaaaaaatcattaaccatgatattgctaagcatgctttg
gtttcagcggtagcaggtagtggtaaaactcaaactttgatagcacgaattgagtatctg
attagcaatcaagtagcaccaaataaaatccttgtattaatgtacaataaatcagcccag
cttgattttgctacacgtctaaaaaaagttctcaaccctgaaattgctaagctagtaaat
gtgcgtactatgcactccttaggtaatagttttcttcaagcttttgctaaggcgggtttt
gtcaaggccgataaaattctcaaggaatatgaagtagatgcgattattgctaagttgcta
aaaacctatcaaaaagagtttaatataaccaaggatattgacaatgaacgaatagaaaca
tttaagaactatatttcattgttaaaatcagatttatctttagataatagtaaactaaaa
gagttaaactcaaaagaaaaaaaattattagataaaatctttagccaatttaatcaagaa
tgtaaaaatcaaaaagctataacttacgatgatatgatatatctaccagctaagcttttt
gaaaaagacaagaatagcgttactcaagtaagtagtttgtattcacatataattattgat
gaatatcaagatataaatcaagttcagcagttcttgctgcgttgtttggttggacgaaat
acttatgtgatggcagttggtgatgtagatcaaactatttatcagtggcgtggctcgaca
ccttattatatgttggaaggttttaaaaaagattttaaaggagttcagcagtatacactt
tcgtatacttttcgttatggtgacctaatatcgttgatggcaaataatattattgtcaat
aataaaaaacgacataacaatttatgtataacttaccctaaactaaataaagctaccgat
ataagtattttagatagtagtgataaagtagtactaaaattaaaagcgttaatacaaaat
ggcgttgatgctagtgatatagccatactcgtacgtaaatataattcaactacagttttt
gaactaagttgtttgtatcatgatttagcatatagtgttgttgctgacaaaaatattttt
agtgagaatctttttaaggctatttatggatatttgatgttatttaacaaaggttatggc
tttgataaacatactcttgagcagcgtgtagagtttatcaaagcaatgttagattatcct
tctttgtatctaaaaaaagatcttaagcaaaaactagcttcacaaattgctagtgatatt
tctcaagctgcaaattgtattgccgctcttagggaaacggttgacaaagcatttaaacaa
aaaaatattttagcaatatctaatagttggcgtaatatttttaataatgtacgtataaaa
aaagcagataaagcgattgattttatattacaaagtttagatttagagaagcaaatatct
aaggtttcaggagaaactcattctagtaaatctaagctacagattattgaaggaatggtt
agttttgctaaaggcaaaaaaaataccttgattgaatttattgaacttttatatcagctt
tatactagatcaaatcagcaaaatcaaagtaatcctaatcaaattcaaattatgtcgatg
catcgagctaaaggtttagagtgggattatgttgtagttcatgatgctacagaaggtggt
ttttttggtgataaaaataccaaagttgatgatgaaattatagaagaagagcgacgacta
ttttatgttgcgattacacgagttaagaaacatttgtttatagtttcatctgatgatata
acacgtttatcatcttggtatcaaattagaaaaaatacttatccacgtgatttgaaatgt
aagaatagcttaagatttttatatgaaggaaatttagttgagtgtgagaattaccttgat
aagtctaattaccatgaggatactaaaaaacttgataatataatctttaaaagatatcac
gacaaaattacaactgaggttgactag
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