Francisella tularensis subsp. novicida U112: AW25_1681
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Entry
AW25_1681 CDS
T03874
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ftx
Francisella tularensis subsp. novicida U112
Brite
KEGG Orthology (KO) [BR:
ftx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ftx03009
]
AW25_1681 (rimO)
Enzymes [BR:
ftx01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AW25_1681 (rimO)
Ribosome biogenesis [BR:
ftx03009
]
Prokaryotic type
ribosomal protein modification factors
AW25_1681 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CDKN3
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
AJI61247
UniProt:
A0Q4U9
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All DBs
Position
complement(1768484..1769803)
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AA seq
439 aa
AA seq
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MIKIPKIGFVSLGCPKNLVDSERIITKLKAEGYDLVDSYDNADMVIVNTCGFLNSAIDES
LEVIGEAIAENGKVLVTGCLGNKADLIKEKHPEVLSITGPQDYENLIEAVHTHAPIFAND
FVSLVPPQGIKLTPRHYSYLKISEGCNNTCTFCIIPDIRGKLKSRSIDNIMKEAEKLKNA
GVKELLVISQDTSAYGVDIKYKSGIWNNKEYQSNIIDLATALGDLDMWTRLHYVYPYPHV
DKIVPLMAQGKILPYLDVPLQHSSPEVLKRMKRPAHTQKTLDRINKWRDICPDITIRSTF
IVGFPGETEADFEHLLDFAEKAQLDRVGCFKYSEVEGAKANQFDNLISEEVKQQRLDEFM
GLQAQISTDKLQRFVGTEQQVIIDAINKDENYAIGRTKYDAPEVDGQVIIGDALERNLKV
GEFATVEITESTEYDLIAD
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaatccctaaaattggttttgtcagcttgggttgtccgaaaaaccttgttgat
tctgagcgtatcataactaagctaaaagctgagggttatgacctggttgatagctatgat
aacgctgatatggttattgttaatacttgtggatttctaaactctgctattgatgagtct
ctagaggttattggcgaagctatcgcggaaaatggtaaggtgctagttactggatgtctt
gggaataaagctgatcttattaaagaaaaacatccagaggttttaagtattacaggacct
caagattatgaaaatctaattgaagctgtgcatacccatgcgccaatttttgctaatgat
tttgtatctttagtaccgccacaaggtattaagcttacaccgagacattattcatatctg
aaaatatcagaagggtgtaacaatacttgtactttttgtattattccggatatacgtggc
aaattaaaaagtcgttctatagacaatatcatgaaagaagctgaaaagcttaaaaatgca
ggcgttaaagagctattggtaatatctcaagatacttctgcgtatggcgttgatattaag
tacaaatcaggtatttggaataataaagaatatcaaagcaacattattgatcttgctact
gctcttggcgatttagatatgtggacgagactacactacgtttacccttatcctcatgtt
gataaaattgtaccacttatggctcaaggaaagatacttccttacctagacgtaccttta
caacattcatctccagaagttctaaagagaatgaaacgcccagctcatacgcaaaaaact
cttgatagaatcaataagtggcgtgatatatgtccggatataactattcgtagtacattt
atagtaggattcccaggtgagacagaggctgattttgagcatttgctagactttgctgaa
aaagctcagcttgatagagtcggttgctttaagtattctgaagtagagggtgcaaaggct
aaccagtttgataatctaatttctgaagaggtcaaacaacagcgtttagatgaatttatg
gggttacaagcacaaataagtaccgataaattacaacgatttgttggaacagaacagcaa
gtaatcatagatgccataaataaagacgaaaactatgcgattggtcgtactaaatatgat
gctccagaagtagatggtcaagtaattatcggtgatgcgctagaaagaaatctaaaagtt
ggtgagtttgcaacagttgagattactgagtcaactgagtatgatctgatagctgattag
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