Francisella tularensis subsp. novicida U112: AW25_27
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Entry
AW25_27 CDS
T03874
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ftx
Francisella tularensis subsp. novicida U112
Pathway
ftx03030
DNA replication
ftx03430
Mismatch repair
ftx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ftx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AW25_27 (holA)
03430 Mismatch repair
AW25_27 (holA)
03440 Homologous recombination
AW25_27 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ftx03032
]
AW25_27 (holA)
03400 DNA repair and recombination proteins [BR:
ftx03400
]
AW25_27 (holA)
Enzymes [BR:
ftx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AW25_27 (holA)
DNA replication proteins [BR:
ftx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AW25_27 (holA)
DNA repair and recombination proteins [BR:
ftx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AW25_27 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
AJI60262
UniProt:
A0Q4B8
LinkDB
All DBs
Position
29667..30644
Genome browser
AA seq
325 aa
AA seq
DB search
MELSYFDLLKKNDLTAYKLFIITGDEPLQKHNTIEKITNQFKAKNYEISYHDLSDQNIDI
LYNEVDSLSLFSIDKFIQFNFDKPPQKKLQQTLVDKLINDDDNVYLLVFSGMKKQNTTAK
WFQSLEHKAIHIRIFQPNLDNAINIIDYETQQLGLSLTKEATQLLALKTEGNLIATKQII
KLLSRQDSRVFDENTIRPFLHEHANFDVFDLSEAILSQHKSKALKILNSILNENDKPPLV
LWALKRELRILSQLKNTQITYHQKIFKDNNIWPAKQKFYTSLANKLSPEKISAGLEKCLD
TDLCIKGARKGNIQLKLNEIVFDIF
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggaattaagttattttgatctactcaaaaaaaatgatctcactgcctataaacttttt
atcataacaggtgacgaacctctacaaaaacacaatactattgaaaaaataactaatcag
tttaaagctaaaaattatgaaataagctatcatgatttgagtgaccaaaatatagatatt
ttgtataacgaagttgatagccttagcttatttagcatcgataaatttatccaatttaac
tttgataaacctccacaaaaaaaactccaacaaacattagttgacaagcttataaatgat
gatgataacgtttacttgcttgtttttagtggcatgaaaaagcaaaacactacagcaaag
tggtttcaaagcttagagcataaagctattcatattcgcatttttcaaccaaatttagat
aacgccataaatattatagattatgaaacacaacaacttggcttaagtctgacaaaagaa
gctacacagctcttagcgctaaaaaccgagggaaatttgatagcaacaaaacaaatcata
aaattactctcacgccaagatagccgagtctttgatgaaaatacaattcgtccttttcta
catgagcacgccaattttgacgtatttgatctttctgaagcaattctctctcagcataaa
agcaaagcactaaagatacttaatagcatcctgaacgaaaatgataagcctcctcttgta
ctctgggctctaaaaagagaattaagaatactctcccaactaaaaaacactcaaataact
tatcatcaaaaaatatttaaagataacaatatttggccagctaaacagaaattttatact
agtttagcgaataagcttagtcctgaaaaaatttcagctggactggaaaaatgccttgat
actgacctatgtatcaaaggtgcaagaaaaggcaatattcagcttaaacttaatgaaatt
gtttttgatattttctaa
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