Francisella tularensis subsp. novicida DPG 3A-IS: CH70_1096
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Entry
CH70_1096 CDS
T03875
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
fty
Francisella tularensis subsp. novicida DPG 3A-IS
Brite
KEGG Orthology (KO) [BR:
fty00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CH70_1096 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fty03021
]
CH70_1096 (rpoD)
Transcription machinery [BR:
fty03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CH70_1096 (rpoD)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_ner
Sigma70_r1_1
Sigma70_r1_2
PspA_IM30
Motif
Other DBs
NCBI-ProteinID:
AJJ47782
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Position
1102038..1103771
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AA seq
577 aa
AA seq
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MTKEDLLSDLKDLMIDGRERGYLTRADILDALPGDVSEDPKIYEEIEAILIDAGIDVYDR
TPQIEEDDERKVSEANLDDLKGKTSDPIRMYMREMGIVDLLDKKGETDIAIRIEEGTTEV
FSTILSYPIVIKTYIERFRELEEKAIDYMNSQDIENEPVARYIRFNEVMAGFSDEQVTEE
KVAEDDHEEKIDTQRAYEFFTNLEKMFEEYQDKPNKKLYTKIVKEFDNLRLSTSHLQKLV
DYIRLPYARVKEFERKILRLCVERSKTPRQEFIKVYKVGSLEWLEPLTKKYKFTENTIRE
IKNLTKQINQFQILMMMDIEELKQVNLEISRSEAKITQAKKEMIEANLRLVVSEAKKYTN
RGLHFLDIIQEGNIGLMKAVDKFDYRKGFKFSTYATWWIRQAITRSIADQARTIRVPVHM
IETINKVNRIKRQILQEKGREATEEEIIEHTPNMTKEKLKKILNISHTPISMESPIGDDE
DSTVGDFIEDKNNYSPIEAANLENLREAIKELIETGLTEREAKVLMMRFGIGMNTDHTLE
EVGKQFNVTRERIRQIEAKALRKLKHPSRSAFLKTFL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaagatttgctctctgatttaaaagatttgatgattgatggtagggaaaga
ggatatttaactagagccgatattttagatgctctaccaggagatgtttcagaagatcct
aaaatatatgaagaaattgaggctatacttattgacgctggtattgatgtctatgataga
actcctcagatagaagaagatgatgaaagaaaggttagtgaagctaatcttgatgattta
aaaggtaaaacttcagatcctattcgtatgtatatgcgcgaaatgggtattgttgatctt
ttagataaaaaaggcgagacggatatcgctattaggatcgaagaaggtactacagaagtt
tttagtacgattttaagctatccgatagtaattaaaacttatattgagcgtttccgtgag
ctagaagaaaaagctatagattatatgaattcccaagatattgagaatgagcctgtagct
agatatatccgttttaatgaagttatggctggttttagtgatgaacaggtaactgaagaa
aaggttgctgaagatgatcatgaggaaaaaattgatactcaaagggcttatgaattcttt
acaaatttagagaaaatgtttgaggaatatcaagataagcctaacaaaaaactttatact
aaaatagttaaggaattcgataatttaagattgtcaacatcacatttacaaaagttggtt
gattatattagattaccttatgctcgagttaaagaattcgaaagaaaaattttaagactc
tgtgttgaaagatcaaaaacaccacgccaagagtttattaaagtttataaagttggttct
ctagaatggttggagccattaactaaaaagtataaatttactgagaatactattagagaa
ataaaaaatttaactaagcaaattaatcaattccaaattttaatgatgatggatattgaa
gagcttaaacaagtcaatcttgagatttcaaggagtgaagctaaaattactcaagcgaaa
aaagagatgatagaagcaaacttaaggctagttgtttctgaagctaaaaagtataccaat
agaggcttacatttcttagatattatccaagaaggaaatattggcttaatgaaagctgta
gataagtttgattatcgtaaaggctttaagttctcgacatatgctacttggtggatacgt
caagcaattactcgttcgattgcagaccaagctagaactattcgtgtacctgtacatatg
attgagacaatcaataaagtaaatagaattaaacgtcagattctacaagaaaaagggcgt
gaagctacagaagaggagattatcgagcatactcctaatatgactaaagagaagctgaaa
aagattcttaatatttcacatacaccaatttcaatggagagcccaattggtgatgatgaa
gattctacagtgggcgattttattgaggataaaaataactattctccgatagaagcagct
aatttagaaaatttacgcgaagcaataaaggagcttatcgaaactggcttaactgagaga
gaagctaaagttctaatgatgcgttttggtattggtatgaatactgatcatactttagaa
gaagtaggtaagcagtttaatgttactagagagcgtattagacaaattgaggctaaggct
cttagaaagcttaaacatccttctagatcggcatttttgaaaacatttttgtaa
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