Francisella tularensis subsp. novicida DPG 3A-IS: CH70_319
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Entry
CH70_319 CDS
T03875
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fty
Francisella tularensis subsp. novicida DPG 3A-IS
Pathway
fty03420
Nucleotide excision repair
fty03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CH70_319
03430 Mismatch repair
CH70_319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fty03400
]
CH70_319
Enzymes [BR:
fty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CH70_319
DNA repair and recombination proteins [BR:
fty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CH70_319
MMR (mismatch excision repair)
Other MMR factors
CH70_319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
ResIII
DEAD
DUF4252
AAA_11
CarD_TRCF_RID
SseB_C
Motif
Other DBs
NCBI-ProteinID:
AJJ46972
LinkDB
All DBs
Position
334027..336249
Genome browser
AA seq
740 aa
AA seq
DB search
MSNYDFILGLNPEQQKATLLEDRNALILAGAGSGKTKVLTSRIAYLCRDKGVSVENILAV
TFTNKAAKEIQQRVEKMLGISTFGMWIGTFHGIAHRLLRKHAHELGLDKNFRILDQDEQA
QLVKKVINNLDLDDKKYPPKLLQNFINKQKDKAIRSNKLTKQYDANYAHIYTAYEERLQL
DNALDFADLLLHLYELFSFNQQLREYYQNKFKYILIDEFQDTNHVQYMWLKLLITDNNYM
MAVGDDDQSIYGWRGAVVDNIHNYVKDLKNVEIIKLEQNYRSTKNILKVANSVIKNNDNR
MSKELWSAAEDGEKVELYCAVNERDEAKYIIDKIRQLHNDGVDYSDIAILYRSNYLSRVL
EESCIYASIPYRIYGGFRFFDRAEIKDALAYLRLAVTNSDNLAFERIINTPTRGIGNKTL
ETIRNYAQINSLSYWQATLDVIQKELVTKRTASLLLKFIELINGISAQISQHSLDKLLES
VINQSGLLASYQEKNSEKDRQKIDNLKELISAAKDFEPQIELLDDNTDILQDFLSFAVLE
AGDMQADEATDSVQLMTIHASKGLEFRYVFLVAAEEGVFPPSSIVNSEEVFDNTSSKKMQ
EKLAEERRLFYVAVTRAMKALTISYAQVRNIFGRSSFQVKSRFVAEIDSQHLSQGKLEFA
AAKPKTKQKANFGMSPFDFLKSNNTTNSFKPGDKVFHKVFGKGVFIKAQAQGTKEFYTVD
FGIDVGQKILLADISNLVKV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgtctaattatgactttatcttaggattaaatccagagcagcaaaaagctacattacta
gaggatcgtaatgctttgattctcgctggtgctggcagtggtaaaacaaaagttctaaca
tcacgtatagcttatctttgtcgtgataaaggcgtatctgtagaaaatatccttgccgta
acattcactaataaagcagcaaaagagatccagcagcgtgtagaaaagatgcttgggatt
tctacatttggaatgtggataggtacttttcatggtattgcacatagactattgcgtaag
catgctcatgaacttggcttagataagaactttaggatacttgatcaagatgagcaggca
caactggttaaaaaggtaatcaataatctagatcttgatgataaaaaatatccgcctaaa
ttactgcagaattttatcaataaacaaaaagataaagctatccgtagtaataaactaaca
aaacagtatgatgccaattatgcgcatatttatacagcttatgaagaaagacttcagctt
gataatgctttggattttgcagatttgcttttacatctttatgagcttttttcttttaat
caacagcttagagaatattatcaaaacaaatttaaatatattttgattgatgagtttcag
gatactaaccatgttcaatacatgtggctaaaattacttataactgataataactacatg
atggcagttggcgatgatgatcagtcaatatatggttggcgtggtgctgtcgtagataat
atccataattatgtaaaagatctcaaaaacgttgaaattataaaactagaacaaaactat
cgctcaacaaaaaatattctaaaagtagctaattcagtaatcaaaaataatgataatagg
atgtcaaaggagctgtggtcagcagctgaagatggtgaaaaagtagagctttattgtgcc
gttaatgagcgtgatgaggcaaaatatattatagataaaattcgccagctacataatgat
ggtgttgattatagtgatatagctatcttatatcgttcaaactatctatcacgtgtctta
gaggaaagttgtatttatgcaagtattccatataggatttatggcggttttaggttcttt
gatagagcagagattaaagatgctttagcatacttaagattagctgttacaaatagtgat
aatttagcatttgagcgaattattaacacaccgacgcgtggaattggtaataagacatta
gagacaattagaaattatgcgcaaattaattcattatcatattggcaagctactttagat
gttattcaaaaagagcttgtaactaaaagaacggcaagtttacttttaaagtttatcgaa
ttaattaatggtatttcggcacaaataagtcagcatagcttagataagctcttagaatca
gtaataaatcaaagtggtcttttagcatcatatcaagaaaaaaatagtgaaaaggatcgc
caaaagattgataacttaaaagagttgataagtgcagctaaagattttgaaccacagata
gagttacttgatgataatactgacatactacaagatttcttgtcatttgctgttctagaa
gctggtgatatgcaagctgatgaagctacagatagtgtgcagttaatgactattcatgct
tcaaaaggtttagagtttcgttatgtgtttctagttgctgcagaagaaggggtttttcca
ccaagttcaattgttaactctgaagaagtgttcgataatacaagctctaagaaaatgcaa
gagaagcttgctgaagagcgtcgccttttttatgtagcagtaacaagagctatgaaagcc
ttaactataagttatgcacaagtacgcaatatctttggtcgtagtagttttcaagttaag
tcacgtttcgttgcagagatagactctcagcatttgagtcagggtaaactagagtttgca
gcggctaaacctaaaactaaacaaaaagcaaattttgggatgtcgccttttgattttctt
aaatcaaataatactaccaatagttttaaacctggtgataaagtatttcataaggttttt
ggcaaaggagtatttataaaagcgcaagcacaagggacaaaagagttttatactgtagac
tttggtatagatgttggtcagaaaatattgctagcagatatctctaatctggttaaggtc
tga
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