Francisella tularensis subsp. novicida DPG 3A-IS: CH70_524
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Entry
CH70_524 CDS
T03875
Symbol
rho
Name
(GenBank) Transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
fty
Francisella tularensis subsp. novicida DPG 3A-IS
Pathway
fty03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CH70_524 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fty03021
]
CH70_524 (rho)
03019 Messenger RNA biogenesis [BR:
fty03019
]
CH70_524 (rho)
Transcription machinery [BR:
fty03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CH70_524 (rho)
Messenger RNA biogenesis [BR:
fty03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CH70_524 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
NACHT
AAA
ResIII
S1CSD-TOTE-2
AAA_22
DUF3086
Motif
Other DBs
NCBI-ProteinID:
AJJ46815
LinkDB
All DBs
Position
complement(551829..553091)
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AA seq
420 aa
AA seq
DB search
MNLNELKYKSVNELMDIAQSLDLESLRARKQELIFSILKYHADKGEDIYGEGILEVLQDG
YGFLRSSDSSYFASPDDIYVSPAFIRKLNLRTGDSIVGKIRPPRENEKYFAVKHIDSVNF
DSPELARKKILFENLTPEYAKERLTMEIGNGSNEDITARVIDLAAPFGKGQRGLIVAPPK
TGKTIMMQNIATSIAKNHPECNLIMLLIDERPEEVTEMQRSVRGEVVASTFDEPAARHVQ
LAEIVIEKAKRLVEHKQDVVILLDSITRLARAYNTVSPASGRVLSGGVEANALQKPKRFF
GAARNTAEGGSLTIIATALVETGSKMDEVIFEEFKGTGNMELHLDRKIAERRVFPAISFD
RSGTRREELLTTPEELQKLWVLRKILGGMEDVQAMEFLTEKMKGSLTNEEFFETMKRGAI
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaaatgaattaaagtataaatctgttaatgagctaatggatatagctcaaagt
ctagatcttgagtcacttcgtgccagaaaacaagagctgatcttctcaattctaaagtac
catgctgataaaggtgaagacatttatggtgaaggtattttagaagtcttacaagatggc
tacggctttctaagatcttccgatagctcgtacttcgcctctccagatgatatctatgtt
tcacctgcttttattagaaaactaaatctgcgtactggtgatagtattgtcggtaagatt
cgtccacctcgtgaaaatgagaaatactttgctgtcaaacacatcgatagtgttaacttt
gattctccagaattagctagaaagaaaattttatttgagaacctgactcctgagtatgct
aaagaaaggctaactatggaaattggaaacggctcaaatgaggatattactgctagagtt
atagatttagcggcaccatttggtaaaggtcagcgtggcttgattgttgcaccacctaaa
actggtaagacaatcatgatgcaaaatatcgcaacgtctattgctaaaaatcatccagaa
tgtaatctaatcatgctactaattgatgagcgtcctgaggaagttaccgaaatgcaacgc
tccgtgcgaggtgaggtagttgcatctacgtttgatgaaccagctgcacgccatgtccaa
ttagctgaaattgtaatcgaaaaagccaaaagattagttgagcacaaacaagatgtagta
atcttacttgactcaatcacaagactagctcgtgcatacaataccgtatctccagcgtct
ggtcgtgtactatctggtggtgtagaggcaaacgccttacaaaagccaaaaagattcttt
ggtgctgcgcgtaatactgccgaaggtggtagcttgacaattattgcaactgctcttgtc
gaaactggttcgaagatggatgaagttatctttgaagaattcaaaggtacaggtaacatg
gagcttcatcttgatcgtaagattgctgagcgtcgcgtcttcccagctattagctttgat
agatctggtacacgtagagaagaactacttactactccagaagagctacaaaaactttgg
gtgctgcgtaagattcttggtggtatggaagatgtccaagctatggaattcttaacagag
aaaatgaaaggctcattaactaatgaagagttctttgaaactatgaaaagaggcgctatt
tag
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