Francisella tularensis subsp. novicida DPG 3A-IS: CH70_528
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Entry
CH70_528 CDS
T03875
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fty
Francisella tularensis subsp. novicida DPG 3A-IS
Pathway
fty03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fty00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CH70_528 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fty03021
]
CH70_528 (rpoA)
03400 DNA repair and recombination proteins [BR:
fty03400
]
CH70_528 (rpoA)
Enzymes [BR:
fty01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CH70_528 (rpoA)
Transcription machinery [BR:
fty03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CH70_528 (rpoA)
DNA repair and recombination proteins [BR:
fty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CH70_528 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_A_bac
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AJJ47446
LinkDB
All DBs
Position
556151..557107
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AA seq
318 aa
AA seq
DB search
MALENLLHPTNIKIDEYAKNATKFSFEALERGVGYTLGFALKQTMLYSIAGACVTSIKIN
DGKVTSLEDVIPCDETVADIILNVKSLPVTLAEGVETGTITFELSGSEEEIFSEEAKLSE
GLAITEEVFICSYNGGKKLKIEAKVEKGVGFRPAQDNFKDGEFLLDATFSPVVFCDFEIK
DARVGRRTDLDKLELNIKTNGNVNCEEALRLAATKIQNQLRNIVDIEEINKGIFVEDPTK
DINPILLKHVEELNLTARSSNCLKAVNIRLIGELVQKTENELLKAPNFGKKSLTEIKDKL
SELGLSLGTLIENWPQDL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcattagaaaatttactacatcctactaatattaaaattgatgaatatgctaaaaat
gctactaagttttcttttgaagccctagagagaggggtaggttatacacttgggtttgct
cttaagcaaactatgctttactctattgctggtgcatgtgttactagtataaaaattaat
gatggtaaagttacttctttagaagatgtgattccatgtgatgagacagttgctgatatt
atcctgaatgttaaatctctgcctgtaactttagcagaaggtgttgaaacggggacaata
acttttgaactatcaggctcggaagaagaaattttttcagaagaagctaagctatctgaa
ggtttggcaataactgaagaagtatttatctgtagttacaatggtggtaaaaagctaaaa
atagaagctaaagtagaaaaaggtgtaggctttagacctgcacaagataattttaaggat
ggtgagttccttttagatgcgactttctcacctgttgttttttgtgattttgagattaaa
gatgctcgtgttggtagacgtactgatcttgataagcttgagcttaatattaaaacaaat
ggtaatgtgaattgcgaggaagctttaagactagcagctactaaaatccaaaatcaatta
agaaatatcgtagatattgaagagattaataagggtatttttgtagaagatcctactaaa
gatataaatcctattttattaaagcatgttgaagaattaaatctaacagctagatcttct
aattgcttaaaagctgtaaatattaggctaattggtgagttagtacagaagacagaaaac
gaacttcttaaagcaccaaattttggtaaaaaatcattaacagagatcaaagacaagttg
tctgagcttggtttatctttaggaactcttatcgaaaattggcctcaagatttataa
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