Francisella tularensis subsp. novicida DPG 3A-IS: CH70_585
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Entry
CH70_585 CDS
T03875
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
fty
Francisella tularensis subsp. novicida DPG 3A-IS
Pathway
fty03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CH70_585 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fty03400
]
CH70_585 (recB)
Enzymes [BR:
fty01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CH70_585 (recB)
DNA repair and recombination proteins [BR:
fty03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CH70_585 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Lys
Cucumo_coat
bMERB_dom
Ctf4_C
Motif
Other DBs
NCBI-ProteinID:
AJJ47600
LinkDB
All DBs
Position
608715..612365
Genome browser
AA seq
1216 aa
AA seq
DB search
MDNLNANTITLQGRHIIEASAGTGKTFNITKLYIRLLLEKKLLPSNILVMTFTKDATQEI
IGRVEKEIRDVLASYTDEKKESDKENYKHLKRSLLEIDEAAIFTIHGFCKKVLSEQAFAS
GMEMDVSMEVDTSDILQKVVEDFFRKHINKSETNFEHLQAYKLHTPEKFLADLENIIRSN
YEILTKQAISLDEFKILKKQQLELFINNHDIVDDFLSKLGKGEPQGKRVDEYHRILEWLK
LDNQTLFPENISIITDGRKISAKLIKPIFIGVKELRDLQQEIKQAQAAQFIRKACLQIRE
SFAKAKEQKGVLDFDDLITKLCQSVKKSPDLVKTLQKQYPVALIDEFQDTDAEQYEILDT
IYPLKNSSHSHEGGNLLTNGLNLKDTRLREYDSSSDQNDSNLLLLMIGDPKQAIYGFRGG
DIFTYLKAKDSCPEENRWSMDTNWRSTGEMIKAYNRLFYKQDYQPEEEGQIGTNIFSDGI
GYQLVKASPDADKKTKDFDDNFKPINYFYYEVAEDDNKSDIDTNLSLWTVNEITRLLNTQ
KVAENDIAILVENGKQAKIIQQALQAKNLSSVYLSQRDNVYHSQEAKEILALMEGINDLE
NKSMLKRALSTSLLGGRANKFISYIDENDVSAWDEEIEKAKSLRQQWHKYGFMAFIMQII
HENFTQRADSKERIITNILHLAELIKVAENKYKHPNQLIKWYRHQLNNTATSEGELRLES
DDNLIKIITIHGSKGLEYSVVFIPFACYASTKKFETSNFTKYYDSDLKQTVYKIGKDDSV
KQQADKEVIEELMRLFYVAVTRAKHRCYIGVAKYNNSEKSPLARFLGYQKDDDWLEKIQS
ITANPANQSLLINIADMREFSLKNLSSKDKNSDYDTLKANYISKLENDSWEMLSFSKISK
SKVQNTALEKEIDEAEDDKTQASDRKLAFRFTASKGADMGNILHNVLEHTDFSLGEIDGN
LLQEQMDRYKVVAVEDFDNLKLWLEECLEAHIPYIDTSFSSSNESIQYGLFDIKDKGFCL
KTIPNSKTLKEAEFYFPVKNENLYKTNILEILQEYRELTKLKTYSHSYVGGNLPTNYQDL
RDTRLREYDNLTNVSNQKIFGMLHGFIDLIFEYEGKFYVADYKSNYLGDTLEDYNQQAMQ
EKNQSSFYDLQYLIYSVALDKYLQQNIESYNYEKHFGGVYYFYLRGMKDGYGVYQARPNL
EIINKLASLFNGDDNV
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggacaacctaaacgcaaacacaataaccctacaaggtcgccatattatcgaggcaagt
gctggtactggtaagacttttaatattactaagttatatatccgacttttgctagaaaaa
aaattattgccaagtaatatccttgtaatgacctttactaaagatgcaacccaagagatt
atcggtagagttgaaaaagagattcgagatgtattagcaagttatacagatgagaaaaag
gagtctgacaaagaaaactacaaacatctaaaaagatcattacttgagatagatgaagcc
gcaatttttactatccatggtttttgtaaaaaggttttgagcgagcaagcctttgctagc
ggtatggagatggatgtctctatggaggttgatacttcagatattttgcaaaaggtagta
gaggattttttcagaaaacatatcaataaaagcgaaaccaattttgaacatttgcaagca
tataagctacatactccagagaaatttttagctgatcttgagaatattattaggtctaat
tatgagattttaacaaagcaagctataagcttagacgaatttaagatactcaaaaaacaa
cagttagaattatttattaataatcacgatatcgtagatgatttcttatctaaattagga
aaaggtgagccacagggcaagagagtagatgagtatcataggattttagaatggttgaaa
ttagataatcaaacactattcccagagaatatttctataattacagatggcagaaagata
agtgcaaaactaataaaaccaatttttattggcgtaaaagaattaagagacctacaacaa
gaaataaaacaagcacaagcagcacaatttatcagaaaagcatgcttgcaaatccgtgaa
agttttgcaaaagctaaagaacaaaagggtgttttagattttgatgatttgattactaaa
ctttgccaaagtgtcaaaaagtcgccagatttagtcaaaacattgcaaaaacaatatcca
gttgctcttatagatgagtttcaagataccgatgctgagcagtatgagatattagatact
atttatcctttgaagaatagtagtcattcccacgaaggtggaaatctccttaccaatgga
ttaaatttaaaagatacccgcttacgcgagtatgacagtagttctgatcagaacgatagt
aatcttctgctcttaatgataggcgatccaaagcaggcaatttatggctttagaggtggt
gatatttttacatatctaaaagctaaagatagttgtccagaagaaaatcgatggagtatg
gacaccaactggcgttcaactggagagatgataaaagcttataatagacttttttataaa
caagattatcagccagaagaagaggggcaaattggaactaatatttttagtgatggtatt
ggctatcagcttgtcaaagcttcaccggatgctgataaaaaaacaaaagattttgatgat
aattttaaacctattaattatttctattatgaagtagccgaagatgataataaaagtgat
attgatacgaatttatcattatggacagtaaatgaaattactagattactaaatacacaa
aaagtagcagaaaatgatatagctattttggtagaaaatggcaaacaggcaaagattatc
caacaagctttgcaagctaaaaatctaagctcagtatacctaagccagcgcgataatgtc
tatcacagtcaagaggctaaagagatcttagctcttatggagggtataaatgatcttgaa
aataaatctatgttgaaaagggcattatcgactagtttactcggtggtagagctaataag
tttattagctatattgatgaaaatgatgtctcagcgtgggatgaagagatagaaaaagcc
aaatctctaaggcaacaatggcataaatatggatttatggcatttattatgcagataata
catgagaatttcactcaaagagcagattcaaaagagcgtattattacaaatattcttcat
ttagcagaacttattaaagtggctgagaataaatataaacaccctaatcaactcattaaa
tggtatcgccaccaactcaacaatacagctacaagtgagggtgaacttagattagaaagt
gatgacaacttgattaagataattacaattcatggatcaaaaggacttgagtattccgtc
gtgtttatcccgtttgcttgctatgcaagcacaaagaagtttgagacaagtaattttact
aaatattatgatagtgacctaaaacaaactgtctacaaaattggcaaagatgatagtgtg
aaacaacaagctgataaagaggttatagaagaattaatgcgactattttatgtcgcagtt
actcgtgcaaagcataggtgttatattggagttgcaaaatataataatagcgaaaagtca
ccattagcaagattcttaggttatcaaaaagatgatgattggttagagaagatccaaagc
ataacagcaaatcctgctaatcaaagtctactgataaatattgcagatatgcgggaattt
agtttaaaaaatttatctagcaaagataaaaattctgattatgatactctcaaagcaaat
tatattagtaaactagaaaatgatagttgggagatgttatctttctcaaaaatatcaaaa
tcaaaagttcaaaatactgcattagaaaaagaaattgacgaggcagaagatgataaaacc
caagcttcagacagaaagctagcatttagatttacagcttcaaaaggagctgatatgggt
aatattctgcataatgttttagagcatacagattttagtttaggtgagatagatggtaat
cttttacaagaacaaatggatagatataaagtagttgctgtagaagacttcgataatctt
aaattatggttggaagaatgtttagaagcacatataccttatatagataccagtttttct
agctcaaatgagagtattcaatatggtttatttgatatcaaggataaaggcttttgccta
aaaaccatcccaaattcgaaaactctaaaagaggcggagttttattttcctgttaaaaat
gagaatttgtataaaacaaatatattagaaatcttgcaagagtatagagagcttacaaaa
ctgaagacatatagtcattcttacgtaggtgggaatcttccaactaactaccaagatcta
agagatacccgcctccgcgagtatgacaatttaactaatgtttcgaatcaaaaaattttt
ggtatgcttcatggttttattgatttgatttttgagtatgagggtaaattttatgttgct
gattataaatcaaattatctaggtgatactctagaagattataatcagcaggcgatgcaa
gagaaaaatcaaagtagcttttatgatttgcaatatttgatatatagcgttgctttagat
aagtatcttcaacaaaacattgaaagttataattatgaaaagcattttggcggagtatat
tatttttatcttagaggtatgaaagatggttatggagtttatcaagctagaccaaattta
gagattatcaacaaacttgctagtttatttaatggagatgataatgtataa
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