Francisella tularensis subsp. novicida DPG 3A-IS: CH70_753
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Entry
CH70_753 CDS
T03875
Name
(GenBank) hypothetical protein
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
fty
Francisella tularensis subsp. novicida DPG 3A-IS
Pathway
fty03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CH70_753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fty03400
]
CH70_753
Enzymes [BR:
fty01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
CH70_753
DNA repair and recombination proteins [BR:
fty03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CH70_753
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CH70_753
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CH70_753
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
ExoI_C
MIB_arm
ExoI_SH3
Motif
Other DBs
NCBI-ProteinID:
AJJ47161
LinkDB
All DBs
Position
771291..772739
Genome browser
AA seq
482 aa
AA seq
DB search
MFSNQTLLFYDLETSGINNSFDQVLQFAAIRTDLDFNEIERFNFFVKLNPDTTPSPMATI
THHISIAQANTGIAEYQAIRKIHKIINAPGTISIGYNTLGFDDEFLRFAFYKNMLPPYSH
QFKNGCSRADLFPIVTCYYLFCNEVLNWPKAIDEGGQEKTSLKLENLNQNNNLYSGGRAH
DAITDVIVTVELAKKLRAANPKMWQFLLAKFNKQNDENTLTQLDVGLEVGDRKYKQAIAV
SGVFGSKNNFISAILDLGQHRHYKNQEIFLRLDSCLFSDFIDEFGSLEAEHWRLTLNKKW
GDIPIILPAKTRFVGKLPQERIELIKANKEFIRNNPETFANFVEYVLEYKYPEIENIDTD
AAIYQSDFMSMADERGCDKFHSLAITQKAQMLNQLPKSYYDRAVRIIGRLDFSKLPAKAQ
MEFQDYLNKIVSLDSDELLIDHKGKTRKTLEDIYQEIEDLRMNYDLTEEQQALLYELEEY
LF
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtaatcagactttgttattttatgatttagagactagtggtataaataattct
tttgaccaagtattgcaatttgctgcaattaggactgacttagatttcaatgagattgag
agatttaatttttttgtaaaattaaatcctgacaccacgccatcacctatggcaacaatt
acgcatcatatttctattgctcaagcaaatactggtatagcagaatatcaagcgattcga
aaaattcataaaattatcaatgctccaggaactataagcataggttataatactcttgga
tttgatgatgagtttttgagattcgctttttacaaaaatatgttacctccatatagtcat
caatttaaaaatggttgctcaagagctgatttgtttccaatagttacatgttattactta
ttctgtaatgaagtattaaactggcctaaggctatcgacgagggtggacaagagaaaact
tctctaaaacttgaaaatttaaatcaaaataacaatctctatagtggcggtagagctcat
gatgctattacagatgtgattgttactgtagaattagctaaaaagctaagagccgcaaat
ccaaagatgtggcagtttttgctagcaaaatttaataagcaaaatgatgaaaatacctta
acacaacttgatgttgggctagaggttggggatcgtaaatataaacaagcaatagctgtg
agtggtgtatttggctcgaagaataattttatctcagcaatattggatttaggacaacat
cgacactataaaaaccaagagatatttctacgcttagatagttgtctatttagtgatttt
atagatgagttcggtagtcttgaagctgagcattggcgtctaactttaaacaaaaaatgg
ggcgatatccctattatcctaccagctaagactcgttttgtcggtaagctaccacaagaa
agaatcgagcttatcaaagctaataaagaatttatacgaaataatccagagacttttgct
aactttgttgagtatgttttagaatataaatatccggagatagaaaatattgacactgat
gcggcaatttatcaaagtgactttatgagtatggctgatgagagaggttgtgataaattt
catagcttggctattacgcaaaaggcacaaatgcttaatcaattaccaaaatcttattat
gacagggctgtgcgtataattggtagattagacttttcaaaattaccagcaaaagctcag
atggagtttcaagattatttaaataaaattgttagcctagatagtgatgagttgttgatt
gatcacaaaggcaaaactcgtaaaactctagaagatatttatcaggaaatagaagattta
cgtatgaattacgatctaacagaagagcaacaagctttgttgtatgagttagaggagtat
ttgttttag
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