KEGG   Francisella tularensis subsp. novicida DPG 3A-IS: CH70_851
Entry
CH70_851          CDS       T03875                                 
Symbol
rpoH
Name
(GenBank) alternative sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
fty  Francisella tularensis subsp. novicida DPG 3A-IS
Brite
KEGG Orthology (KO) [BR:fty00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fty03021]
    CH70_851 (rpoH)
Transcription machinery [BR:fty03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CH70_851 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 DUF7383 Sigma70_r1_2 HTH_25 HTH_28 IF2_N NirdL-like_HTH SpoIIID DNA_pol3_a_NI
Other DBs
NCBI-ProteinID: AJJ47163
LinkDB
Position
871465..872343
AA seq 292 aa
MANKKLLPATKTKTLPVVSDNNLSAYLNFVNTLPVLSLEQEQELARRYKYKKDLDAAQQL
VLSHLRFVTKIARNFSGYGLSIADLIQEGNIGLMKAVSKFDPDQGVRLVSFAVHWIKAEM
HDYVLKNWKIVKVATTKAQRKLFFNLRSSKDKIGWLSSEDIKELAEELGVKEETVIEMEK
RMCQEDASLDLPYTDDDGEQTSQQSLYLEDKSSNIEHQVVQQDYYDNFKAIVKDVLSGFD
TRTKDIIMSRYLLDNKATLQDLAAKYNISAERVRQIEEDALAKLKKAIKNRS
NT seq 879 nt   +upstreamnt  +downstreamnt
atggctaacaaaaaattattaccagctacgaaaacgaaaactttaccagttgtatctgat
aataatctcagtgcgtatttaaattttgtcaatactttaccagtattatcactagagcaa
gagcaagagctagcaagacgctataaatataaaaaagatctagatgctgcacagcaactt
gtgttatcacatttacgctttgttactaaaatagcaagaaatttttcaggttatggactt
tcaatagcagaccttatccaagagggtaatattggtcttatgaaagctgtaagtaagttt
gacccagatcaaggtgttagattagtttcatttgcagttcattggattaaggcggaaatg
catgactatgtcctaaaaaactggaagatagtcaaggttgctaccacaaaagcacagcgt
aaattattttttaatcttagaagtagtaaagacaaaattggttggttaagctcggaagat
atcaaagagttagcagaagagctaggtgtcaaagaagaaactgtcattgagatggagaaa
agaatgtgtcaggaggatgcaagtcttgatttaccatacactgatgatgacggtgagcaa
acttcgcagcaaagtttgtatctagaggataagtcttcaaacattgagcatcaagttgtt
cagcaagattactatgataatttcaaagcgattgtaaaagatgttttaagtggttttgat
acacgtacaaaagatattatcatgtcgcgctatttacttgataacaaggcaactcttcag
gatctagctgctaaatataatatctcagccgaaagagtacgccaaattgaagaagatgct
ctagccaagcttaaaaaagctatcaagaatcgctcttaa

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