Fulvivirga ulvae: LVD17_00570
Help
Entry
LVD17_00570 CDS
T09269
Name
(GenBank) PHP domain-containing protein
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fua
Fulvivirga ulvae
Pathway
fua03030
DNA replication
fua03430
Mismatch repair
fua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LVD17_00570
03430 Mismatch repair
LVD17_00570
03440 Homologous recombination
LVD17_00570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fua03032
]
LVD17_00570
03400 DNA repair and recombination proteins [BR:
fua03400
]
LVD17_00570
Enzymes [BR:
fua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LVD17_00570
DNA replication proteins [BR:
fua03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LVD17_00570
DNA repair and recombination proteins [BR:
fua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LVD17_00570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
Motif
Other DBs
NCBI-ProteinID:
UII32331
LinkDB
All DBs
Position
complement(125401..128388)
Genome browser
AA seq
995 aa
AA seq
DB search
MYLNNHTYYSFKYGAISPGELLVEAKRLGVECLTLTDINSTAGCLNFVRLSEKYGVRPVL
GIDFRNGAQQQFVGIAKNNEGFRELNECISWYLHEKEDIPSRAPAFEHAYVIYPFSGFTG
GDLKENEFIGVSPEDIMRLRFSPWKNRPEKLVALQTVTFRKKRDYNAHRLLRAIDNNTLL
SKLPKTEEGKPHHQMMPAAELKGKYEEFGVLVDNAHRLLDSCHITFEFGETAQLNMKTYT
GSEEEDYRLVHRLCMRGLKYRYENPGKDIKKRINDELATIRQKGFLAYFLINCKIVSYAR
KKGYFYVGRGSGANSIVAYLLRITDVDPIELDLYFERFINLYRKNPPDFDIDFSWRDRED
ITRFIFEYFNKRVPNGVALLATYSTFQYRAMVRELSKVFGLPPHEIDRLADGGEAVDQVS
ALVLRYGQLISGFPSHMSVHAGGILIAEKSIHNYTATSLPPKGFPVTHFDMVVAEDIGLY
KFDILGQRGLGKIKDTLEIIKGNRPDEDEIDIHDIKRFKVDEQVKAILREGQAIGCFYVE
SPAMRMLLKKLRVDHYLGLVAASSIIRPGVAKSGMMREYILRFRDEERVKDAHPVLLKIM
PDTFGVMVYQEDVIKVAHYFAKLDLGEADVLRRGMSGKFRSREEFQKVKEKYFANCKAEG
HSFELAADVWRQIESFAGYAFAKGHSASYAVESYQSLFLKAHYPLEYMVSVLNNGGGFYR
RELYIHEARMHGAEIVPPCVNKSEAYAVIEGVRIYLGFDLIKDLEAQVMENILRARSKRS
FLNLSDFLKRVFISLEQLSLLIRAGSFRFTGKSKKELLWQAHIALGRTKKTNPVPSLFDS
PAREIKLPKLYTYQFEDAFEEMELFGFPLCDPFMLLRDEPEVSVNKASNMMNFLNQEITI
LGYLVAIKNTSTNKGDRMNFGTFLDRKGHFIDTVHFPQVAYKHPFRGKGIYKITGKVVVE
FEFCTLEVSAMEKLPYIDDPRYTDDTGVLRVISNR
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaaacaaccacacatactatagctttaaatacggggccatcagtcctggggag
ctgctggtggaggcgaagcggctgggggttgagtgcttgacgttgacggatattaactct
acggcaggatgcctgaactttgtgcggctctcggagaaatacggggtcaggcctgtgttg
gggattgatttcaggaatggggcacagcaacagtttgtagggattgctaaaaacaatgag
ggtttcagagagcttaatgagtgtatttcatggtatttgcatgaaaaagaagatattccc
tccagggcacctgcctttgaacatgcttacgtaatctatccattctcaggctttaccgga
ggagatttgaaggaaaacgagtttataggagtaagccctgaagatattatgcggctgcga
ttttctccgtggaagaacaggccggagaagctggtggcattgcaaaccgttactttccgt
aaaaagagggattataatgcccatcgcctgttgagggccatcgataataataccctgctg
agcaaactgcctaaaacagaggaaggcaaacctcaccaccagatgatgcccgctgcggag
ctgaaaggaaagtatgaagagtttggggtgctggttgataatgcccatcggcttctggat
agttgccatattacatttgagtttggggaaacggctcagctcaacatgaaaacctatacc
gggtcggaagaagaggattaccgcctggtgcaccggctctgtatgcgcgggttgaagtac
cgctacgagaatcccggcaaggatattaaaaaaagaataaacgatgaactggctaccata
cggcaaaaaggttttctggcttacttcctcatcaactgcaaaatagtaagttatgcccgg
aagaagggctatttctacgttggcagaggcagcggagccaacagtattgtagcttacctg
ttgcgaataaccgatgtagaccccatagagctggacttgtactttgagcggtttatcaat
ctgtaccggaaaaatccgcctgatttcgatatcgatttttcatggcgcgacagggaggat
ataacaaggtttatttttgaatacttcaacaaaagggtacccaacggcgtggccttgctg
gctacctatagcacttttcagtaccgggccatggtgcgcgagcttagcaaagtatttggt
cttcccccccatgagatagaccggctggcagatggcggtgaagcagtagaccaggtctcg
gcattggtgctgcggtacgggcagttgatttccggcttccccagccatatgagtgtacat
gcaggaggtattttaatcgccgaaaagtcgatccataactataccgccaccagcctgccg
cctaaaggctttcctgttacccattttgatatggtagtggcggaagacataggactgtat
aagtttgatatcctggggcagcgaggacttggcaagatcaaagataccctggagatcatc
aaagggaacaggcctgatgaagatgagatcgatatccatgacattaagcgctttaaagtg
gatgagcaggtaaaagccatattgcgggaggggcaggccatagggtgcttttatgtggag
tcgcccgctatgcgtatgctgctgaagaaactcagagtagaccattacctggggcttgtg
gccgccagctccatcatcaggcccggcgtggccaagtcggggatgatgcgtgagtacata
ctgaggtttcgtgatgaggaaagagtgaaagatgcacaccccgtattgttgaagatcatg
cctgatacctttggggtaatggtgtaccaggaagacgtaattaaagtggcgcactacttt
gccaagctagacctgggtgaggccgacgtacttcgccgggggatgtcagggaagttccgt
tcaagagaagaatttcaaaaggtgaaagagaagtattttgccaactgtaaagccgagggg
cactcctttgaactggctgctgatgtatggcggcaaatagaaagctttgccggttatgct
tttgcgaaaggacactcggcatcttatgcggtggaaagctaccaaagccttttcctgaaa
gctcactacccgctggagtatatggtaagtgtgctcaataatggaggtggcttttaccga
agggaactgtatattcacgaagcgcgtatgcatggagctgagattgtacctccatgtgtc
aacaaaagtgaggcctacgctgtaatagagggcgtgaggatctacctgggctttgacctg
atcaaagacctggaagcacaggtgatggaaaatatattgagagcccgcagcaagcgatca
tttctgaacctaagcgactttttgaagcgcgttttcatctcgctggagcaactgagcctg
cttatacgtgcgggaagcttccggtttaccggtaaatcgaaaaaggagctgctctggcag
gcccatatcgcactgggaagaaccaaaaagaccaaccccgtaccatcattgtttgattca
ccggccagggaaattaagctgcccaagctgtacacctaccagtttgaagatgcctttgag
gaaatggaactcttcggcttcccgctctgcgatccgttcatgctcctccgcgatgaaccc
gaagtaagcgtaaacaaagccagtaacatgatgaatttcctcaaccaggaaataactatc
cttggctatctcgttgccattaaaaacaccagtacaaacaaaggtgatcgcatgaacttc
ggcaccttcctagaccgtaaaggccatttcatcgataccgtacactttccccaggtagcc
tataagcacccattcagaggcaaaggcatctataaaattaccggtaaagtagtagtagag
ttcgaattctgcaccctcgaagtctctgccatggaaaaactaccctacatcgatgatcca
aggtacacagatgatacgggagtgttgagggtgattagtaatcggtga
DBGET
integrated database retrieval system
