Fulvivirga ulvae: LVD17_06090
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Entry
LVD17_06090 CDS
T09269
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fua
Fulvivirga ulvae
Pathway
fua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LVD17_06090 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fua03019
]
LVD17_06090 (recQ)
03400 DNA repair and recombination proteins [BR:
fua03400
]
LVD17_06090 (recQ)
Enzymes [BR:
fua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LVD17_06090 (recQ)
Messenger RNA biogenesis [BR:
fua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LVD17_06090 (recQ)
DNA repair and recombination proteins [BR:
fua03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LVD17_06090 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
GH123_cat
Motif
Other DBs
NCBI-ProteinID:
UII33390
LinkDB
All DBs
Position
1447882..1450068
Genome browser
AA seq
728 aa
AA seq
DB search
MLVEEKEKLRGKLKEVFGYNQFRGNQEAIIKNILNGRNTFVIMPTGAGKSLCYQLPALMT
DGVAIVISPLIALMKNQVDQMNAFGVNAQFLNSTLTKAEMNRVKRESLDGTIKLLYVAPE
SLTKVENVDFLKKANISFVAVDEAHCISEWGHDFRPEYRRIKEIIGQLGNLPIIALTATA
TPKVQMDIQKNLQMEGADVFKSSFNRTNLYYEVKQKKHAKKNLVHFLRDHKNKSGIVYCL
SRKKVAEIAELLNVNGFKAAPYHAGLEPSIREKNQDDFLNEDVDIIVATIAFGMGIDKPD
VRFVVHYDVPKSLEGYYQETGRAGRDGLEGKCLMFYSHNDINKLEKFNKDKPVQERENAR
VLLQEMSYYAESPVCRRKQLLHYFGEEYATENCEMCDNCVKPKDRYEAKDVATIAVEAAL
KTGERFGLNHLVDVIRGVENQYVKSYDHHTLDVYGKGDNDSAEYWKSVVRQSLIYELLEK
DIDNIGVLKVSQKGHDFLKKPYSIQFAIDHEYVDSGDEEENSERTPVSTKAYDETLFGLL
KALRKKIAHEKDLPPYVIFQDPSLEEMATTYPTSEEEMAQINGVGMGKVKKFGSEFIKKI
SEYVDENDIVTASEVVIKSSVNKSKMKIFIIQQIDRKIDLDEIAETKGISFDELLTEIEN
ICYSGTKLNLDYYINDVLDHDKQEDIYEYFLNAETDDIQVALEDEDNEEYSEEELRLMRI
KFLSEYAN
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgctggtagaagagaaggaaaaattgagaggtaaactaaaggaggtttttggttacaac
cagtttagaggaaatcaggaggctattatcaagaatatcctcaatggcaggaatactttc
gttatcatgcccacaggagcagggaaatccttatgctatcagttgcctgccctgatgacg
gatggagttgcaattgtcatctctccccttattgcgctgatgaaaaatcaggtggaccag
atgaatgcttttggagtaaacgcccagtttttaaattcaacacttacaaaagctgagatg
aacagagtgaagcgggaaagccttgacggcacaataaaactgctatatgttgcgcctgaa
tctctcactaaagttgaaaatgtcgattttctaaaaaaggcaaatatttcctttgtggcc
gttgatgaggcacactgtatctcggaatggggccatgattttcgcccggaatacagaagg
atcaaagagattataggacagctcggtaatttgccgatcatagcactaactgctaccgcc
acacccaaggtacagatggatatccagaaaaacctccagatggaaggtgcggatgtattc
aagtcatcatttaaccgtactaacctgtattatgaggtaaaacagaaaaagcacgcaaag
aaaaatctggttcattttctgcgtgatcataagaacaagagtggaatagtatactgcctc
agcagaaaaaaggtagcagaaatagctgagctgctcaatgttaacggatttaaagccgcc
ccgtaccatgcagggcttgaaccttccattagagagaaaaatcaggatgactttctcaat
gaggatgttgatatcatagtggcaactattgcttttggcatggggatagacaaacctgat
gtacgttttgtggtacactacgatgttcccaagtctctcgaaggatactatcaggaaacc
ggccgcgcaggtagagacggacttgaaggcaaatgcctgatgttttacagccataatgac
attaataagttagaaaaattcaataaagacaagcctgttcaggaaagggaaaatgcccgg
gtactgttacaggaaatgtcttactacgccgagtccccagtatgccgaagaaagcagctg
ctgcattactttggagaagagtacgcaacagaaaactgtgaaatgtgcgacaactgcgta
aaaccaaaagataggtacgaagcaaaagatgttgcaacaattgccgttgaagctgcttta
aaaaccggtgaaagatttgggctaaaccaccttgtagacgttatacggggagtggaaaac
cagtacgttaaatcatacgaccatcatacccttgatgtatacggcaaaggcgataacgac
tccgctgagtactggaagtccgtggtaagacaatctctgatatacgaactgctggagaag
gatatagataatatcggtgtgttgaaagtgagccagaaaggccatgacttcctgaagaag
ccatactccatacaattcgccatagaccatgaatatgtagactccggtgatgaagaggag
aatagtgaaagaaccccggtatctaccaaagcttacgatgaaaccctctttggtctgcta
aaagctctgcgcaagaaaatagcacacgagaaagatctgcccccttatgtaatctttcaa
gatccttcactggaggagatggctaccacttaccctacttcggaagaagaaatggcccag
atcaacggagtaggtatgggaaaagtgaagaagtttgggtcagagtttatcaagaaaatc
tcagaatatgttgatgaaaatgatatagttacggcttccgaggttgtaattaagtcctcc
gtcaacaaatcaaaaatgaagattttcatcattcaacagattgacagaaagatcgacttg
gatgaaattgcggaaaccaagggcatatcttttgatgaactgctcacagaaatagaaaac
atctgctattctggcactaagcttaatctggactactatatcaatgacgttctggatcac
gacaagcaagaagacatctatgaatacttcctcaatgctgaaacagatgacatccaggtg
gcattggaagacgaggataacgaggagtattcggaggaagaactgagactgatgaggatc
aagttcttgtctgaatatgcaaattaa
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