Fulvivirga ulvae: LVD17_07695
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Entry
LVD17_07695 CDS
T09269
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fua
Fulvivirga ulvae
Pathway
fua03030
DNA replication
fua03410
Base excision repair
fua03420
Nucleotide excision repair
fua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LVD17_07695 (polA)
03410 Base excision repair
LVD17_07695 (polA)
03420 Nucleotide excision repair
LVD17_07695 (polA)
03440 Homologous recombination
LVD17_07695 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fua03032
]
LVD17_07695 (polA)
03400 DNA repair and recombination proteins [BR:
fua03400
]
LVD17_07695 (polA)
Enzymes [BR:
fua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LVD17_07695 (polA)
DNA replication proteins [BR:
fua03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LVD17_07695 (polA)
DNA repair and recombination proteins [BR:
fua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LVD17_07695 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LVD17_07695 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
DNA_pol_lambd_f
TOR1A_C
HHH
GMAP
Motif
Other DBs
NCBI-ProteinID:
UII33700
LinkDB
All DBs
Position
complement(1890219..1893017)
Genome browser
AA seq
932 aa
AA seq
DB search
MSKPEKKLFLLDAYALIYRAHFAFSKTPRISSKGVNTGVMFGFINTLLEVLQKQKPTHIA
VVFDTSAPTFRHEQFAEYKAHREETPEDIKVGIPVVKDIVRAFNIPVLEMDGYEADDIIG
TLAKKAGKADYEVFMMTPDKDFGQLVEEHVYLYKPAYMGNAVDVLGVPEVLAKWDIERVD
QVTDMLGLQGDTADNIPGIPGIGPKTASKLIKEFGSVEELVANVDKLKGKQKENVEAYGQ
QGILSKELATINTEVPIEFNEKDLIYEGPDEEKLKPICEELEFRTIMKRIFGEELTGKTT
TSASGQLSMFSDESKVAIEVTETVTVEKTSIKTVEHDYHLVTSAEKRNELIKFLQMQDEF
CFDTETTNIDAVEAEIVGLAFSYVKGEAYYVALPADFEEAKQVLLEFKPVMENEKITKIG
QNVKYDILALKKYGVHVKGKIFDTMLAHYVIEPEMPHNMDAIAEQYLNYKCVPITSVLGV
KGKRQRNMRDIAPEDVVEYAGEDADITLQLKQVLSDQIKKEKKLDSLLEEVEHPLVYVLS
DMEHEGVRIDEEALKQMSAELQQASLQAQEEIYKIAGCEFNIASPKQLGEILFDRLKLIE
KPKKTKSGQYATGEEILGRLAAEHDIARKILEFREYQKLKSTYVDALPKMISVSDGRVHT
DYGQAVAATGRLSSNNPNLQNIPIRTEKGREIRKAFVPRDENHVLVSADYSQIELRIAAS
FAKDKDMIEAFKNGRDIHATTAAKVFNVSLEDVDPNMRRKAKEVNFGIIYGISAFGLSQN
LNIPRAEANDIIKAYFKEFSSIKNYMDESINKAKEQGYVETIQGRRRYLRDINSRNATMR
GYAERNAINAPIQGSAADIIKIAMVNIHRWLKEEGLGTKMILQVHDELIFDVPKDEVEKV
KENVIRLMMSAVSLEVPLEVEAGVGENWLKAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacccgaaaaaaagttatttcttcttgacgcctacgcacttatatacagagcc
cattttgcattcagtaaaacccccaggatcagttcaaagggtgtaaacaccggcgtaatg
ttcggttttataaatactcttctggaagtactgcaaaagcagaaacctacccatatcgct
gtagtttttgatacctcagcacctactttcaggcatgagcaatttgcagaatacaaggca
catcgtgaagaaacgcctgaagatataaaagtagggataccggtagtgaaggatatcgtt
agggcatttaacattcctgtactcgaaatggatggctatgaagcggatgatatcattggt
acgctggccaagaaggcgggtaaagcagattatgaggtgtttatgatgaccccagacaaa
gattttgggcagttggtagaggagcatgtatacctgtacaagccggcttacatgggcaat
gccgtggatgtactgggcgtgcctgaggtgctggcaaagtgggatatagaacgtgtcgat
caggtaacggatatgctcggcttgcagggtgatacggctgataacattcccgggattccg
ggcatcggacccaagactgcgtcaaaactcattaaggagtttggttctgttgaagagctg
gtggctaacgtggataagctcaaaggcaagcaaaaggaaaatgtggaggcctatggccag
caaggtatactttctaaagagctggcaacaattaataccgaggtgcctattgagtttaat
gaaaaggatctgatatatgaaggacctgatgaggaaaaactaaagccgatatgcgaagag
cttgagttcaggaccataatgaagcggatatttggtgaagaattaacaggaaaaaccacg
acatctgcatcagggcaactttccatgttcagtgatgagagtaaagtagccatagaagtt
acagaaactgtaacggttgaaaagacgagtatcaaaacggtggaacatgactaccacctg
gtgacgtcagcagagaaacgaaacgaactgataaaattccttcaaatgcaagatgagttc
tgtttcgatacggaaaccacaaatattgatgctgtggaggcggagattgtgggtctggcg
ttttcgtatgtgaaaggggaagcctactatgtggcacttccggcagactttgaggaggcg
aagcaagtactcttggagtttaaaccggtgatggaaaatgagaaaatcactaaaataggt
cagaacgttaaatacgacatccttgccctgaaaaagtatggtgtccatgtaaagggtaaa
atatttgacaccatgctggcgcactatgtgattgagcctgaaatgccacataacatggat
gccatagcagagcaatatttgaattataagtgtgtgccgattacttctgttttaggtgtt
aaaggtaagcggcagagaaacatgagagacatagccccggaagatgtagtggaatatgcc
ggagaagatgccgatattacactgcaattaaaacaggtgctgtcagaccagatcaaaaag
gagaaaaagcttgacagcttgcttgaagaggttgagcacccattagtttatgtgctctcc
gacatggagcacgaaggtgtaagaatagatgaagaggcattgaaacaaatgtctgcggaa
ctacagcaagccagcctgcaggcccaggaggaaatttataaaatagccggttgtgagttt
aatatagcctcacctaagcaattgggcgagatcctgttcgaccggctcaagctaattgaa
aagcctaagaaaacgaaatccggtcagtatgctacaggtgaagagatactgggaaggctg
gcggcagagcatgatatagccaggaaaatactggagttccgggaatatcaaaaactaaaa
tccacctatgtggatgcattgccaaagatgattagtgtcagcgacgggcgggtacatacc
gattacggacaggccgtggcagctaccggcaggttgagttctaataatccgaaccttcaa
aatattccgataagaacggaaaaaggcagggagatcaggaaagcgtttgtgccaagggat
gaaaaccatgtgctggtgtcagcggattattcgcagatcgaacttcgtatagccgcatct
tttgccaaggataaggacatgatcgaggccttcaaaaacgggcgggatatccatgccact
actgctgccaaagtttttaacgtatcccttgaggatgtagacccgaatatgaggaggaag
gccaaagaggtaaattttgggattatctacggaatatctgcctttggtctctcgcaaaac
ctgaacatcccgcgggctgaggccaatgatattatcaaggcgtattttaaagagttttct
tccatcaaaaactatatggacgagtccatcaacaaagccaaggagcaggggtatgtagaa
actatccagggaagaagacgatacctcagagacatcaactccagaaatgctactatgagg
ggctatgccgaacgaaatgcgatcaacgccccgatccagggtagtgcggcagatatcatt
aagatcgccatggttaacattcaccggtggttgaaagaagaaggtcttggaacaaaaatg
atcttacaggtgcatgatgaattgatttttgatgtacccaaagatgaggtagaaaaggtc
aaagaaaatgtgatcaggttgatgatgtcggcagtaagcctggaagtgcctttggaagta
gaggctggggtgggcgagaactggttgaaagcacattaa
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