Fulvivirga ulvae: LVD17_09130
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Entry
LVD17_09130 CDS
T09269
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fua
Fulvivirga ulvae
Pathway
fua03030
DNA replication
fua03430
Mismatch repair
fua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LVD17_09130
03430 Mismatch repair
LVD17_09130
03440 Homologous recombination
LVD17_09130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fua03032
]
LVD17_09130
03400 DNA repair and recombination proteins [BR:
fua03400
]
LVD17_09130
Enzymes [BR:
fua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LVD17_09130
DNA replication proteins [BR:
fua03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LVD17_09130
DNA repair and recombination proteins [BR:
fua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LVD17_09130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
Ig_NUP210_4th
DUF7508
Motif
Other DBs
NCBI-ProteinID:
UII33977
LinkDB
All DBs
Position
complement(2217371..2218738)
Genome browser
AA seq
455 aa
AA seq
DB search
MYAIVDIETTGGFAGNNRITEIAIFLHDGNEVTDSYETLINPGQIIPSYITGLTGIRQDM
VESAPSFEEIAHELYDYLKDKIFVAHNVHFDYSFLKKEFEKVNLSFSPRRLCTVRVSRVL
FPGLRSYGLGNLCEQLNIEIRNRHRAGGDAQATAILFDMLIKKDSEYVALALKKNSKETT
LPPNLPKEEFENLPEQPGVYYFLNQRSEVIYVGKAIDIKKRITGHFSGTSKNRRNQAIRN
EIHHISYELTGNELVALLLESHEIKRLWPKYNRAQKVLSNTWGIYKYEDRQGYLRFNISK
SVKGLQPLIFFHSHSDAWQFMMNKIRDFDLCPKLSGIQKSDGPCYDLPLGQCAGACDGKE
TTQVYNNKVDEAIDSFHETQKSFAIVGSGRTEEESSVVLVERGTYCGFGFCDKDVSISHL
DDIKTVINNYKTTIEIDHYIQSYINSPQADIIELT
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
gtgtatgctatagtcgacatagaaacaactggaggttttgcgggaaataatagaattact
gaaatagccatctttttacatgatggcaatgaagttacggattcctatgaaacactaatt
aatcccggacagatcatcccatcttatatcaccggccttacaggtataaggcaggatatg
gttgagtcagctccttcttttgaagaaattgcccatgagctatacgactatttaaaagat
aagatctttgtagcacacaacgtacatttcgactattcattcctcaaaaaggagtttgaa
aaagtaaacctcagtttcagtcccagaagactatgtacggtaagggtaagcagggtactg
tttcccgggttgagatcgtacggtttaggtaatctttgtgagcaactaaatattgaaatt
cgaaaccgccatcgcgccggaggagatgcccaggctacagctattctttttgatatgctc
attaaaaaggacagcgaatatgtggccctggcgttgaagaaaaattcaaaggaaaccaca
ctaccacctaacctgcctaaggaggagtttgaaaacctacccgaacagcctggtgtgtat
tatttcctgaaccagaggagcgaggtaatctacgtagggaaggctatcgacatcaagaaa
aggataacgggacatttctcgggaaccagcaaaaaccggagaaaccaggccataagaaac
gagatccatcatatcagctatgaacttacgggaaatgagctggtggctttgctcctggaa
tcgcatgaaatcaagcggctgtggcccaaatacaaccgagcacaaaaagtgctgagcaac
acctggggtatttacaaatacgaagaccggcaggggtacctgcgatttaatatcagcaaa
agtgttaaaggccttcagcccctgatcttctttcattcgcattccgatgcctggcaattt
atgatgaacaagatccgtgattttgatctttgtcccaagctctcaggcatccaaaaatcc
gacggcccttgttatgacctgccactcggacaatgtgccggcgcatgcgatggtaaggag
accactcaggtatacaataacaaagtagatgaggcaatagactctttccatgaaacacaa
aaatcatttgctattgtagggtcggggcgtacggaagaagagagttccgttgtactggta
gaaagaggcacttattgtggttttggtttttgcgacaaggatgttagcatttcgcatctc
gatgatataaagacagttatcaacaattacaaaacaaccattgagattgatcattatatc
caaagctatataaatagccctcaggcagatatcattgaactgacctga
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