Fulvivirga ulvae: LVD17_09935
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Entry
LVD17_09935 CDS
T09269
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
fua
Fulvivirga ulvae
Brite
KEGG Orthology (KO) [BR:
fua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fua03019
]
LVD17_09935
03009 Ribosome biogenesis [BR:
fua03009
]
LVD17_09935
Messenger RNA biogenesis [BR:
fua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LVD17_09935
Ribosome biogenesis [BR:
fua03009
]
Prokaryotic type
rRNA processing factors
LVD17_09935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
DnaJ_CXXCXGXG
TMEM106_N
S1
ATPTG10
Motif
Other DBs
NCBI-ProteinID:
UII34133
LinkDB
All DBs
Position
complement(2401734..2403293)
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AA seq
519 aa
AA seq
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MSNELIINSTQNGCRIALLKDKSLVEFHHDEDGNQFTVGDIYLGTVRKVVQGLNAAFIDI
GYEKDAFLHYLDLGPKFSSLQDFTKRALSKKNTSSKLEKFGLKPDIDKHGKITNVLSRNQ
QILVQVVKEPISTKGPRLSCELSLAGRYLVLVPFSNTVNVSKKISSSDERKRLVRLVSSI
KPENFGVIIRTVAQGKDVRELDSDLRHLLDIWHQGAKTLKTAKPREKVIGEMSKASSILR
DVLNESFDNIHIDDKEIYDEVRTYIKTIAPDKEKIVKLYNGKAKIFENFGIEKQIKSAFG
QSVSLKGGGYLIIEHTEALHVIDVNSGNKSNREEDQEATALSVNIEAAKEIARQLRLRDM
GGIIVVDFIDMKRAENKKTIYKVIKDEMAADRSKFTVLPLSKFGLMQITRQRVRPEMNIT
TKEVCPTCQGTGKISASILVSDLIERSVDHLMTKQNDKDITVVIHPFIYAYFTKGTMSRR
LKWFLKYFKWIKMVQDSSLAITEYKFLNKFGEEIDVGEL
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaacgaattaataatcaattcaactcaaaacggatgtcgtatagccctattaaaa
gataaaagtcttgttgagttccatcatgacgaagatggaaaccagtttacagttggagat
atatacctgggtactgtcagaaaagtagttcagggtctcaatgcagcgtttattgatata
ggttacgagaaagatgcctttctgcattatctcgatctgggacctaaattcagttcgctt
caggatttcacgaagcgtgcgctttcaaaaaaaaatacctccagtaaactggaaaaattt
ggcttaaagccagacatagataaacatggaaagatcaccaatgtactttccaggaatcaa
caaatactagtacaggttgtaaaagagcctatatcaacaaaagggccgcgattatcctgc
gagttgtctctggcaggcagatatttggtacttgttcctttttcgaacacagtaaatgtc
tctaagaaaattagcagcagcgacgagcgaaagagactcgtaagactggtgtcatcaatc
aaacctgagaattttggtgtaattataagaacagtagctcagggtaaagatgtaagggag
ctggactcagacctccggcatcttcttgacatatggcatcagggtgccaaaacacttaaa
acagccaagccaagggaaaaagtaatcggtgagatgagcaaagcctcgtccatcctcaga
gatgttcttaatgagtcgtttgacaacatccatatcgatgataaagagatatatgatgaa
gtaaggacttacatcaagaccatcgcccctgacaaggagaagattgtaaagctttacaat
ggcaaagcaaagatctttgagaattttggcatagaaaaacagataaaatcagccttcggt
caatctgtaagcctcaaaggcggaggatacctgatcatagagcatacggaagcgcttcat
gttatcgacgtaaacagcggtaataaatctaaccgtgaagaggaccaggaagcaaccgct
ctttcggtaaacattgaggccgctaaggaaatagcaaggcagctcaggttgcgtgatatg
ggtggcattatcgtagtcgacttcattgatatgaagagggctgagaacaaaaagacgatc
tataaggtcattaaagatgaaatggctgcggaccggtctaagttcaccgttctgccattg
tcaaaattcggcctgatgcagatcacacgccagcgggtaaggccggaaatgaacattacc
actaaagaagtgtgccctacctgccagggaacaggtaagatcagtgcttctatactggtt
tcagaccttattgagagatcagttgaccatctgatgaccaagcagaacgacaaggatata
accgtggttatacatcctttcatttatgcctatttcaccaaaggtacgatgtccagaagg
ctgaagtggtttttgaaatatttcaaatggatcaaaatggtgcaggactcttcgctggcc
attacagaatacaaattcctcaacaagtttggagaggaaatagatgtaggggaattgtaa
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