Fulvivirga ulvae: LVD17_15830
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Entry
LVD17_15830 CDS
T09269
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
fua
Fulvivirga ulvae
Pathway
fua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LVD17_15830 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fua03019
]
LVD17_15830 (rny)
Messenger RNA biogenesis [BR:
fua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LVD17_15830 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
HD_5
Motif
Other DBs
NCBI-ProteinID:
UII29769
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Position
complement(3700861..3702426)
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AA seq
521 aa
AA seq
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MADSIYLILAGVVGLGIGIAIGRALMSKVNKGKEQELEEKAKGIIREAELSAENIKKDKI
LEAKEKFLKLKAEFEEDASRKKNQIITNENKLKQKEQHLSKEFEQVKRKETELDELKENL
STQLEVVNKKKAELDKFNQQKVSILEKISNLTADEAREQLVESLKDEAQTRASSFIKDIL
EEAKLSATKDAKKIVLETIQRTATEHAIENCVSVFNIESDDIKGKIIGREGRNIRALEAA
TGVEIIVDDTPEAIIISGFDPVRREIARLSLHRLVVDGRIHPARIEEIVAKTKKNIEEEI
IEIGERTVIDLGIHGLHPELIKMVGRMRFRSSYGQNLLQHSREVANLCATMASELGLNPK
QAKRAGLLHDIGKVWPDEPEKPHAIIGMELAQKYKEHPVVCNAIGAHHDEIEMTSMISPI
IQACDAISGARPGARREVMESYIKRLKELEQLALSFDGVHKCYAIQAGRELRVMVDAENV
SDERAGQLSFDISQKIEKDMQYPGQIKVTVIREMRSVSYAK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcagattcaatctatttaatactggctggcgttgtaggcctcggtattggtatcgcg
atagggcgggccttgatgagcaaggtcaataaaggaaaagagcaagagcttgaagaaaaa
gcaaagggcataatccgtgaagctgaactttcagcagaaaacatcaaaaaagataagatc
ctcgaagctaaagagaagtttctgaaacttaaggcggagtttgaagaagacgcatcccgc
aagaaaaaccagattattaccaacgaaaacaaattaaaacaaaaggaacagcacctttcc
aaagaatttgaacaggtaaaaagaaaagaaaccgagctcgatgaattaaaggaaaacctc
tctactcaactggaggtagtgaataagaaaaaagccgagcttgataagtttaatcagcag
aaggtctctatacttgaaaaaatatctaaccttacagcggatgaggctcgtgagcaactg
gtagagtctttgaaagatgaggcacaaacgcgcgcttcttccttcatcaaggatatactg
gaagaggccaaactttccgctaccaaggatgccaaaaaaatcgtactggagaccattcaa
agaacggccactgagcatgccatagaaaactgtgtctctgttttcaacattgaaagcgac
gacattaaaggcaagatcataggcagggaagggcgaaacatcagagcacttgaagctgct
acaggtgtagagatcattgtggatgacacccccgaagccatcattatttcagggttcgac
cccgttcgtcgtgagatcgccaggttatcgctacaccggttggtggttgacggcagaata
cacccggccagaattgaagagattgtagccaaaaccaagaaaaatattgaagaagaaatt
atcgagataggtgaaaggacagtgatcgaccttggaatccatggcctgcaccccgagctg
atcaaaatggtaggaagaatgaggttcaggtcatcttatggtcagaacttactacagcac
tctcgtgaagtagccaacttatgtgccacaatggcctctgagctaggcctaaaccctaag
caggccaaacgcgcaggtctgctgcatgatattggtaaagtatggccggatgagccggag
aagccccacgctattattggtatggagctggctcagaaatacaaggaacaccctgtagta
tgcaatgccattggagctcaccacgacgaaattgagatgacttccatgatctcccctatc
attcaggcttgtgatgccatatcaggagcaaggcctggagcacgccgagaggtaatggaa
agctatatcaaacgactgaaagagctggagcaacttgcacttagctttgatggcgtacat
aaatgctacgctatacaagccggccgtgaactacgcgtaatggtagatgcggaaaatgta
agcgacgaacgcgccggacaattgtcttttgatatttctcaaaaaatagaaaaagatatg
cagtatcccggacagattaaagtgaccgtgatcagggaaatgagatcggtatcttacgcc
aaatag
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