Fulvivirga ulvae: LVD17_19950
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Entry
LVD17_19950 CDS
T09269
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fua
Fulvivirga ulvae
Brite
KEGG Orthology (KO) [BR:
fua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fua03032
]
LVD17_19950 (topA)
03400 DNA repair and recombination proteins [BR:
fua03400
]
LVD17_19950 (topA)
Enzymes [BR:
fua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LVD17_19950 (topA)
DNA replication proteins [BR:
fua03032
]
Prokaryotic type
DNA Topoisomerases
LVD17_19950 (topA)
DNA repair and recombination proteins [BR:
fua03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LVD17_19950 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
SBP_bac_3
O-FucT
Motif
Other DBs
NCBI-ProteinID:
UII30568
LinkDB
All DBs
Position
4702881..4705193
Genome browser
AA seq
770 aa
AA seq
DB search
MPKNLVIVESPAKAKTIEGYLGKDYKVTSSYGHVRDLPKGDKAIDKEHGFKPTYEITADK
KEVVKELKKLVKEAETIYLASDDDREGEAISWHLKEALNLNDDNTRRIVFREITKNAIEN
AIKNPRGIDIDLVNAQQARRVLDRLVGFELSPILWKKIKTGLSAGRVQSVAVRLVVERER
DVEKFDPVSSYKITATFDLGGKKLLSAELPKKFDTEEEAMQFLEACKDAEFSIIDLQKKP
SKKSPAPPFTTSTLQQEASRKLGFSVSQTMTIAQKLYEAGIISYMRTDSVNLSDEAVNGA
VSEIKKAYGDNFVKVRKYKTKSSGAQEAHEAIRPTNFAVTSPGVDRNGERLYELIWKRAI
ASQMADAQIEKTTATIGISTVPQQLVATGEVVKFEGFLSVYLESTDDEDEGEEQKGMLPP
LKVGQELILDTMKARQGFTRPPARYTEASLVKKLEEMGIGRPSTYAPTISTIQKRNYVIK
ENREGTERQYTVLELKDKKVTPKSLTEVVGTEKSKLFPTNMAMVVNDFLVEHFPNVTNYS
FTAEVEKLFDEVAQGLKEWDKMIGEFYSEFHSKVENTENIERSSVPKSKELGIDPKSGKK
VIARLGKFGPIAQIGGDDEDEKPQYASLRKGQFIESITLEDALELFKLPREIGEFEGKPM
QAAIGRFGPYIRHDGKFVSIPKDDDPYSIEADRAIELIQQKREADANKFIKSFDENPDVQ
VLNGRYGPYIKFGKKNVKIPKGKEPKELTLEECIELAEKTPAKKGGRKKK
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagaatttagtcatcgtggagtctcctgcaaaggccaaaacaattgaaggatac
ctggggaaggattataaagtaacatcaagctacggtcacgttcgtgacctgccaaaagga
gacaaagctattgacaaagagcatggctttaaacctacttacgaaatcaccgccgataaa
aaagaggtggtaaaagaactgaaaaaactggttaaggaagcggagactatctacctcgca
agtgatgatgaccgcgaaggagaggccatttcgtggcacttaaaagaggccctgaacctt
aacgatgacaatacaagaaggatcgtattcagggagatcacaaaaaatgccattgagaat
gcgatcaaaaacccgagaggaattgatatagaccttgttaatgcgcagcaggcacgccgt
gtgcttgacaggcttgttggttttgagctttcacctatcctttggaaaaagattaaaacc
ggactttccgcagggcgcgtgcagtcagtagcagtaaggctggtagtagaaagggaaagg
gatgtggagaaatttgatcctgtcagttcttataaaataacggcaacctttgaccttgga
ggcaaaaagctgctaagcgcggagctgccgaaaaaatttgacactgaggaggaggcgatg
cagtttctggaggcatgcaaagatgcagaattctccattatagatctgcaaaagaagcct
tccaaaaaatcaccagcacctccgttcactacttctacactgcagcaggaagccagcaga
aagctgggtttctccgtgtcacagaccatgaccatagcccagaagctttatgaagcaggt
atcatttcctatatgagaacagactctgttaacctgtcggatgaagctgttaacggtgca
gtgagtgagatcaaaaaagcttacggagacaatttcgttaaagtcagaaaatataaaact
aaatcatcaggcgcccaggaagctcacgaagccatcaggccgaccaactttgctgttacc
agtccgggagtggacaggaatggagagcgcttgtatgaactgatttggaaaagggcaatt
gcctcccagatggccgatgcccagatagaaaaaacaactgccaccattggcatctctacc
gtgccacagcaactggttgcaaccggggaggtggtcaagtttgaaggctttctttctgtt
tacctggagtctaccgatgatgaagacgaaggagaagagcaaaagggaatgcttccaccg
cttaaagtagggcaggagcttatacttgataccatgaaagcccgtcaaggctttacaagg
cctccagccaggtacactgaagccagtctggtgaagaagctggaagaaatgggtatagga
cgcccgtcaacgtatgctcccaccatttcgaccattcagaaaaggaactatgtgatcaaa
gagaacagggaaggtactgagagacaatacacggtgttggaactcaaggataaaaaggtt
acaccgaagtcgctgacagaagtggtaggtacggagaagagtaagctgttcccaaccaac
atggctatggtggtgaatgatttccttgtcgaacattttcctaacgtgaccaactatagc
tttaccgcagaagtagagaagctttttgatgaagtagcgcaagggttgaaagagtgggat
aaaatgattggtgaattttattctgaattccactccaaagtagaaaataccgaaaatatt
gagcgatcttccgtacccaagtcaaaggagttagggatcgaccctaaatctggtaaaaaa
gtaattgccagactaggtaaattcggaccaatagctcaaataggtggggatgatgaggat
gagaagcctcaatatgccagcctgagaaaagggcagtttattgaaagcattaccctggaa
gatgccctggaactgttcaagctaccaagggagattggtgagtttgaaggcaaacccatg
caggcagccatagggaggtttgggccttacatccggcacgacggcaaatttgtatccatc
cctaaagatgacgacccgtacagcatagaggctgacagggctatcgaactcatccagcaa
aagagagaagcagatgccaataagtttataaaatcgtttgatgagaatcctgatgttcag
gtgcttaacggaaggtatggcccatacattaagtttggtaaaaagaatgtgaagataccg
aaaggtaaggagcctaaagaacttactttggaggagtgcatagagcttgcggagaaaaca
cctgccaaaaaaggaggcagaaaaaagaaataa
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