Fulvivirga ulvae: LVD17_24410
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Entry
LVD17_24410 CDS
T09269
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
fua
Fulvivirga ulvae
Pathway
fua02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fua00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LVD17_24410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fua03021
]
LVD17_24410
Transcription machinery [BR:
fua03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LVD17_24410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
Sigma70_r3
Sigma70_r4_2
UPF0122
Scm3
HTH_28
Motif
Other DBs
NCBI-ProteinID:
UII31440
LinkDB
All DBs
Position
complement(5801656..5802519)
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AA seq
287 aa
AA seq
DB search
MRQLKISKQITNRESQSLDKYLQEIGKVDLLTPDEEVELAQRIREGDQLALEKLTKANLR
FVVSVAKQYQNQGLSLGDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNRVGSLNKISKTFSELEQKYEREPSPDELAEVLEVTTAEVVDTMKISGRHV
SMDAPFVQGEENSLLDVLENDLEETPDSELMNDSLRREVQRALSTLTQREADVISLYFGL
NGEHSMTLEEIGEKFNLTRERVRQIKEKAIRRLRHTSRSKALKPYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacagcttaagattagcaagcagatcacgaacagagagagtcagtcgctcgataaa
tatctgcaggaaataggtaaagtcgatttattaacaccagatgaagaagtagagctggct
cagcggataagagaaggagatcaattagcacttgaaaaactgaccaaagcaaacctgcgt
ttcgtagtatctgttgccaaacagtatcagaatcagggattgtcgttgggcgatttgatc
aatgagggtaatctgggtttgataaaagctgctcagcgatttgacgaaacacgtggtttc
aagtttatttcatatgcagtttggtggatcagacagtctatcctgcaagctttggccgaa
caatcaagaattgtacgattaccccttaatagggtaggttctctaaataagatatctaaa
acgttttctgaactggagcaaaagtacgaaagagagccatcgcctgatgagttggcagaa
gtgcttgaagtaactactgcggaagtggtggataccatgaaaatttccggtcgtcacgtg
tctatggatgcaccttttgtccagggagaagaaaacagccttttggatgttcttgaaaat
gatctggaagaaactccggattcggagttgatgaatgattcgctgagaagggaggttcaa
cgtgcactatctacattaacacagcgagaggctgatgtgatttcgctgtacttcgggtta
aatggagagcattctatgactcttgaggaaataggagagaagtttaaccttacaagggag
agagtacgtcagataaaagaaaaagcaatacgcagactaaggcatacatccaggagtaag
gcattgaaaccttatttaggatag
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