Fulvivirga ulvae: LVD17_27720
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Entry
LVD17_27720 CDS
T09269
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fua
Fulvivirga ulvae
Brite
KEGG Orthology (KO) [BR:
fua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fua03032
]
LVD17_27720
03400 DNA repair and recombination proteins [BR:
fua03400
]
LVD17_27720
Enzymes [BR:
fua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LVD17_27720
DNA replication proteins [BR:
fua03032
]
Prokaryotic type
DNA Topoisomerases
LVD17_27720
DNA repair and recombination proteins [BR:
fua03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LVD17_27720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Aida_N
Motif
Other DBs
NCBI-ProteinID:
UII32076
LinkDB
All DBs
Position
complement(6830475..6831500)
Genome browser
AA seq
341 aa
AA seq
DB search
MQQINDCPHQLVHVTDNDPGFTRHKWGRGFIYKDCRGKKISDKEILARISKLVIPPMWDK
VWICPQENGHMQVTGYDVKGRKQYIYHKLWVYHRQNSKYGKLGEFGTILPVIRRKIEKDI
NLKGWPKEKILSLIVMLLDAHYIRIGNRYYEKENKTYGLTTLRRKHLAEKNGKLYLSYKA
KSGKYREVQIASKKLVKLIKKISELPGYEIFKYQDENKTIQRLDSQEVNRYLEIVSGDCF
TAKDFRTWGGTVLAINYYKEVLEEIKHNPRLNLETNIVKRVAATLGNTVATCKEYYIHPK
VLEVLVNDEVSKFSKRPLPPMKYKNELSAHEKLALKIITAR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagattaacgattgccctcaccagcttgtacatgttacagataatgatcccggg
ttcacacgccacaaatggggacgcggctttatttacaaagactgcagaggcaaaaaaata
tccgataaagagatccttgccagaatcagtaagttggtgataccaccaatgtgggacaag
gtatggatatgcccgcaggaaaacggtcatatgcaggtaacagggtatgatgtgaagggg
cgtaagcaatacatctatcacaagttatgggtataccacagacaaaactcgaaatatggt
aagttgggcgagtttggaactatcttgccggtgatccggagaaaaatagaaaaagatatc
aacctgaaaggctggcccaaagaaaagatactttcactgattgtaatgctgctggatgcg
cactatatcagaataggtaacaggtactacgaaaaggaaaataaaacctatggacttact
actttgagacgcaagcatttggcggaaaaaaacggcaagctttatctcagctataaagct
aaaagtggtaaataccgggaagtgcaaatagccagtaaaaaacttgtaaagcttattaaa
aagatttccgagctgcccggctatgagatattcaagtatcaggacgaaaataaaaccata
cagcgtcttgactcgcaagaggtaaaccgctatctggagatcgtatccggtgattgcttt
actgccaaggacttccgcacctggggaggaacagtgctcgcgattaattattacaaagag
gtacttgaagaaataaaacacaacccccggcttaatctggagacgaatattgtaaaacga
gtagccgccactctgggaaatacagtggcaacttgcaaagagtattacatccatcccaaa
gtgttggaagtattggttaatgacgaggtcagcaagtttagtaaaaggcccttgccccca
atgaaatataaaaatgaactctctgctcacgaaaagctcgccttaaagatcatcactgcc
cggtag
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