Fusobacterium ulcerans: C4N20_01190
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Entry
C4N20_01190 CDS
T05433
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ful
Fusobacterium ulcerans
Pathway
ful03410
Base excision repair
ful03430
Mismatch repair
ful03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ful00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C4N20_01190 (recJ)
03430 Mismatch repair
C4N20_01190 (recJ)
03440 Homologous recombination
C4N20_01190 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ful03400
]
C4N20_01190 (recJ)
DNA repair and recombination proteins [BR:
ful03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
C4N20_01190 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C4N20_01190 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C4N20_01190 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Toprim
Hom_end
bHLH_INO4
Motif
Other DBs
NCBI-ProteinID:
AVQ29611
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All DBs
Position
255239..256921
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AA seq
560 aa
AA seq
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MDTKAAQWKKNRLLTTLLLNRGFEDGKKADEFISPKISDFRDPFKFEKMEKVVDKILEKR
EKKEKVFIYGDYDVDGITAAVFLVLVFRNIGIEVDYYIPNRMEEGYGLDKKTIDFINKEK
GKLVITVDTGVNSIEDVKYAESLGIDVIVTDHHKSIKEEEDDHLLLLNPKLSDTYEFKYL
SGAGVALKVAQGVYQKLKIDIKDLHQYMDIVMIGTVADVVPMTDENRIIIKQGLRALKKT
KVKGLMYLLKYLKFQNKTINTTDVSYFISPLINSLGRVGISKMGADFFLKEDDFEIYNII
EEMKKSNKKRRELEKNIYDEANQEIAKVGLKNLKCIFLSSEKWHPGVIGVVSSRLSVKYN
IPVTLVAFKDGIGKASCRSVKGISVFNIFQNMGKKLVRFGGHDLAAGFIVKSENFEEVKN
IFEASIENIKIEKEKKSLKIDTEYSIENIDEDMFETMESISPYGLENPHPLFIDRDLSFE
TIKKFGVDERHFNGIIRKNGKNYHMVAFDLGHKINEIEAKIQKFDIVYYPEKTLYRGEEI
FQIRVKDIKIKDDFYEIFTK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
attgatactaaggctgctcaatggaagaagaatagattacttactaccttattactcaat
agaggctttgaagatggaaaaaaagcagatgaatttataagcccaaaaatttctgatttt
agagaccctttcaaatttgaaaaaatggaaaaagtagtagataaaattttagaaaaaaga
gaaaaaaaggaaaaagtttttatttatggagattatgatgttgatggaataacagcagct
gtatttcttgttctagtcttcagaaacattggaatagaagtagactattacattcccaat
agaatggaagaaggctatggactggataaaaaaaccattgacttcattaataaagagaag
ggaaaactggttatcactgttgatactggtgtcaattctatagaagatgtaaaatatgca
gagagtttagggatagatgtgatagtcactgaccatcataaaagtataaaagaggaggaa
gatgatcatctccttctcttgaatcccaaattaagtgatacttatgaattcaaatacctg
tctggagctggagttgctttaaaagtagctcagggtgtatatcaaaaacttaaaattgat
ataaaagacctgcaccagtatatggatatagttatgattggcacggttgctgatgttgtt
cctatgacagatgaaaacagaataataattaaacagggtcttagagctttgaaaaaaact
aaagtaaaagggcttatgtatcttttgaaatatcttaaatttcaaaataaaactataaat
acaacagatgtaagttactttatatctcctctaatcaattctcttggaagagtaggaatt
tccaaaatgggagctgattttttcttgaaagaggatgattttgaaatctataatataata
gaagaaatgaaaaaatcaaataagaaaagaagagaacttgaaaaaaatatatatgatgag
gccaatcaggaaattgcaaaagtaggacttaaaaatcttaaatgtatattcttaagttca
gaaaaatggcatcctggagttattggtgttgtgtcttcaagattaagtgtaaaatataac
attcctgtaacacttgtcgcatttaaagatggaataggaaaagcatcttgcagaagtgta
aaaggaataagtgttttcaatatatttcagaatatgggtaaaaagcttgttagatttggt
ggacacgatcttgcggctggcttcatagtaaagtctgaaaattttgaagaggtaaaaaat
atttttgaagcaagtatagaaaatataaaaatagaaaaagaaaaaaagagtttgaaaata
gatacagaatattctattgaaaacattgatgaagatatgtttgagactatggaaagtata
tcaccatatgggcttgaaaatccacatcctttatttattgatagagatctttcctttgaa
actatcaaaaaatttggtgtagatgaaagacattttaatggaataataagaaaaaatgga
aaaaattatcatatggtagcattcgatctaggtcataaaataaacgaaatagaagctaaa
attcaaaagtttgatattgtttattaccctgaaaaaactctgtatagaggagaggaaatt
tttcaaatcagggtaaaagatattaaaataaaagacgatttttatgaaatttttactaaa
tag
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