Fusobacterium ulcerans: C4N20_01380
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Entry
C4N20_01380 CDS
T05433
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ful
Fusobacterium ulcerans
Pathway
ful03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ful00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C4N20_01380 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ful03019
]
C4N20_01380 (recQ)
03400 DNA repair and recombination proteins [BR:
ful03400
]
C4N20_01380 (recQ)
Enzymes [BR:
ful01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C4N20_01380 (recQ)
Messenger RNA biogenesis [BR:
ful03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C4N20_01380 (recQ)
DNA repair and recombination proteins [BR:
ful03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C4N20_01380 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AVQ26790
LinkDB
All DBs
Position
complement(300927..302843)
Genome browser
AA seq
638 aa
AA seq
DB search
MKNEARRLLKEIYGYDDFRDGQKVIVSSVLQRRDTLGVMSTGGGKSICYQIPALLFKGIT
IVISPLISLMKDQVDTLKLLGIKSVYINSTLSREEYSDAMGRIRSGNVKIIYIAPERLAN
EKFVTFIKKLNIAMIAVDEAHCISQWGHDFRKSYLEIPNFVKKIGKPIQMLALTATATAE
VRQDIEEKLEMKNPFSYVAGFDRENIFFKVVKNVVAEAYIVDYLKKAPKKSGIIYASTRK
EVDSLYAYLELREFSVGKYHAGLTEKERKDFQEKFIKDEIKIMVATNAFGMGIDKSNVRF
VLHRNIPKDMESYYQEAGRAGRDGAPAEAVLMYFEEDVGTQEYLIEMNEETENQLKKEKM
EKLDKMVEYAYLESCYREYILKYFGDKRIKNYCGKCGNCKSFKNVEDLTVEAQKILSCIG
RAKESIGISTLTNILVGKSDTKMDKKEYHKLSTFGIMQERDRNWIEEFINFLISDGYLEQ
SAGSFPVLRLNERARKVLKNETAVFRRVDEKVTFDYYEDPLFENLNQLRNRIAEKEKVAP
YIVFSDLTLMEMAEKKPKNRWDMLKIRGIGNQKFKNYGEEFLKVINSFSDEDMEIIRLES
IVEDKYLEESKLEDLKNKLQINISSEKLREILIKSLFS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgaagcgagaagactgcttaaagaaatatatggatatgatgatttcagagat
ggacagaaagtaatagtatcttcagttcttcaaagaagagacactttgggagtaatgagc
actggaggaggaaaatctatatgctatcaaattccagctcttctttttaaaggaataaca
atagttatttctccactgatatctttgatgaaggatcaggtagatactttaaagctttta
ggaataaaaagtgtatatataaattctactctctctagagaagaatattctgatgctatg
gggagaataagaagcggaaatgtgaaaataatatatatagctcctgaacgtcttgccaat
gagaaatttgtgacttttataaaaaaactgaatatagctatgatagctgtagatgaagca
cattgtatttcacaatgggggcatgatttcagaaaaagttatctggaaatacctaatttt
gtaaagaagataggaaagccaatacagatgctggctcttacagcaacagctactgctgaa
gtaagacaggatatagaggaaaaacttgaaatgaaaaatccattcagctatgttgcggga
tttgacagggaaaatatattttttaaggtagtgaaaaatgtagttgcagaagcctatata
gtagattacttgaaaaaagcacctaaaaaatcaggaataatctatgcttctaccagaaaa
gaggtagacagcctatatgcctatcttgaacttagggaatttagtgtggggaaataccat
gctgggcttactgaaaaagagagaaaagattttcaggagaagttcattaaagatgaaata
aaaataatggtagctacaaatgcttttggaatgggaatagataaatccaatgtaagattt
gtacttcatagaaatataccaaaggatatggagagttactatcaggaagctggacgtgct
ggaagagatggtgcccctgctgaagctgttctcatgtattttgaagaagatgtaggaaca
caggaatatctcatagagatgaatgaggaaactgaaaatcagttgaagaaagagaaaatg
gaaaagcttgataagatggtggagtatgcctatctggagagttgttacagagaatatata
ttgaaatattttggagataagagaataaagaattattgtggaaaatgcggtaactgcaaa
tctttcaaaaatgttgaagatcttactgtagaagctcaaaagatactttcttgcatagga
agagcaaaagaaagtataggaatatccactttgacaaacatacttgtgggaaaatcagat
actaagatggataaaaaagaataccataaattatctacttttggaataatgcaggagaga
gatagaaactggatagaggaatttataaactttttgatatcagatggatatcttgaacaa
agtgcaggaagttttccagtgctcaggctgaatgaacgagccagaaaagttttgaaaaat
gaaactgctgtatttagaagagtagatgaaaaagtaacatttgattattatgaagatcca
ttatttgaaaacctgaatcagttaagaaatagaatagctgaaaaagaaaaagtagcacca
tatatagtattttcagatctgacacttatggaaatggcagagaaaaaacctaaaaataga
tgggatatgctgaagataaggggaataggaaatcagaaatttaaaaactatggggaagaa
tttttaaaggttattaatagtttttcagatgaagatatggagattatccgacttgaaagt
atagttgaagataaatatctggaagaatctaaactggaagacttaaaaaataaattacaa
ataaatataagttcagaaaaattaagagaaattttaattaagtcattatttagttag
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