Fusobacterium ulcerans: C4N20_01705
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Entry
C4N20_01705 CDS
T05433
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ful
Fusobacterium ulcerans
Pathway
ful03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ful00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C4N20_01705 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ful03019
]
C4N20_01705 (pnp)
03016 Transfer RNA biogenesis [BR:
ful03016
]
C4N20_01705 (pnp)
Enzymes [BR:
ful01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
C4N20_01705 (pnp)
Messenger RNA biogenesis [BR:
ful03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C4N20_01705 (pnp)
Transfer RNA biogenesis [BR:
ful03016
]
Prokaryotic type
tRNA degradation factors
C4N20_01705 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
SAC3
Motif
Other DBs
NCBI-ProteinID:
AVQ26853
UniProt:
A0A2P1S0P9
LinkDB
All DBs
Position
complement(366735..368834)
Genome browser
AA seq
699 aa
AA seq
DB search
MFDEKKVELELAGRTLSFSTGKIARQSCGAVMVQYGETVLLSTVNRSKEPRKGADFFPLT
VDYIEKFYAAGKFPGGFNKREGRPSTNATLTARLIDRPIRPMFPEGFNHDVHIVNTVFSY
DEKNTPDYLGIIGSSMALMLSDLPFLGPVAGVVVGYKDGEFILNPTPEELETSDLELSVA
GSKDAVNMVEAGAKELDEETMLAAIMFAHENIKKICAFQEEFAKVAGKEKIDFVKKEVLP
LVKDFIDEKGMERLKAAVLTLGKKAREEAVDSLEEELMEAFILENYEGIEEEDIPEEVIG
EFKGYYHDLMKKLVREAILYHKHRVDGRKTTEIRPLFAEVGVLPIPHGSAMFTRGETQAV
VVTTLGTKEDEQLVDDLEKEYFKKFYLHYNFPPYSVGETGRMGSPGRRELGHGSLAERAL
SYVIPSEESFPYTIRVVSEITESNGSSSQASICGGSLSLMAAGVPIKEHVAGIAMGLIKE
GEEFTVLTDIMGLEDHLGDMDFKVAGTKNGITALQMDIKITGITEEIMRIALKQALDARN
EILVVMNNAISAPADLRPNVPRIHQMKIATDKIAALIGPGGKNIKGIIEKTGATIDISDD
GNVSIFSKDEEVLKETITLVNAFVKDVEVGEIYNGRVVNIAKFGAFMEILPGKEGLLHVS
EISNERVANVEDVLKVGDRFDVKVISTENGKISLSKKKI
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgagaaaaaagttgaattagaattagcaggaagaacgctaagtttttcaact
ggaaaaatagcaagacaatcttgcggagctgtaatggttcaatatggggaaactgtattg
ttgagtactgtaaaccgtagcaaagaaccaagaaaaggggctgactttttccctttaaca
gttgattatattgaaaagttttatgctgctggaaaatttccaggaggattcaacaaaaga
gaaggaagaccttcaactaatgcaacattgacagctagacttatagacagacctataaga
ccaatgttcccagaaggattcaatcatgatgtacatattgtaaatactgtattttcatat
gatgagaaaaatacacctgactatttaggaataataggatcttcaatggcacttatgctt
tctgaccttccattcttaggaccagtagcaggggttgtagtaggatacaaagatggagag
tttattttaaacccaactccagaagaattagaaacaagtgaccttgaattatcagtagca
ggatcaaaagatgctgtaaacatggttgaggctggagcaaaagaattagatgaggaaact
atgcttgctgcaataatgtttgctcatgaaaatatcaaaaaaatctgtgcttttcaagaa
gaatttgcaaaagttgctggaaaagagaaaatagattttgttaaaaaagaagttttacca
ttagtaaaagatttcattgatgaaaaaggaatggaaagacttaaagctgctgttcttact
ttaggtaaaaaagcaagagaagaagcagtagattcattagaagaagaattaatggaagca
tttattcttgaaaattatgaaggtattgaagaagaggatattccagaagaagtaattgga
gaattcaaaggttactatcatgatcttatgaagaaactagtaagagaagctatcctttat
cataaacatagagtagatggaagaaaaactactgaaataagaccattatttgcagaagtt
ggagttcttcctattcctcacggatcagcaatgtttacaagaggagaaactcaagctgtt
gtagtaactactttaggaactaaagaagacgagcagttagttgatgacttagaaaaagaa
tatttcaaaaaattctatcttcactataacttccctccatattcagtaggagaaacagga
agaatgggatcacctggtagaagagaattaggacatggatctcttgctgaaagagctctt
agctatgtaattccatcagaagaatcattcccatatactataagagtagtatctgagata
actgaatcaaatggatcatcttctcaagcatcaatttgtggaggatcactttcacttatg
gctgctggagtacctattaaagagcatgtagctggaatagctatgggtcttattaaagag
ggagaagagttcactgtattaacagatatcatgggacttgaagatcacttaggagatatg
gactttaaagtagcaggaactaaaaatggtataactgcacttcaaatggatataaaaata
actggaataacagaagaaataatgagaatagctttgaaacaagcattagatgctagaaat
gagatattagtagttatgaataatgctatttctgcaccagcagatcttagacctaatgta
cctagaatccaccaaatgaaaatagctactgataagatagctgctttaattggaccagga
ggaaagaatatcaaaggaatcatagagaaaactggagcaactatcgacatcagcgatgat
ggaaatgtttctatcttctctaaagatgaagaagtattgaaagagacaataactcttgta
aatgcatttgtaaaagatgtagaagtaggagaaatctataatggaagagtagtaaatatt
gctaaatttggagcatttatggaaatacttccaggaaaagaaggccttcttcacgtttct
gaaatctcaaatgagagagtagcaaatgtggaagatgtgttaaaagttggagatagattt
gatgtaaaagttatctctactgaaaatggaaaaattagtttaagtaaaaagaaaatttag
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