Fusobacterium ulcerans: C4N20_03725
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Entry
C4N20_03725 CDS
T05433
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ful
Fusobacterium ulcerans
Pathway
ful00541
Biosynthesis of various nucleotide sugars
ful01100
Metabolic pathways
ful01250
Biosynthesis of nucleotide sugars
Module
ful_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
ful00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
C4N20_03725 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ful01005
]
C4N20_03725 (rfaD)
Enzymes [BR:
ful01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
C4N20_03725 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
ful01005
]
Core region
C4N20_03725 (rfaD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
KR
Motif
Other DBs
NCBI-ProteinID:
AVQ27239
UniProt:
A0AAX2JDE7
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Position
complement(820949..821947)
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AA seq
332 aa
AA seq
DB search
MIIVTGAAGMIGSAFVWKLNEMGINDIIVVDKFRTEEKWLNLRKRDYADWVDRDDLFEWL
SNPANAEKITGVVHMGACSATTEKDGDYLMSNNYGYSKKLWEFCAARQINYVYASSAATY
GAGELGYNDDVTPEELKKLMPLNKYGYSKKIFDDWAFKQKIAPKQWAGTKFFNVYGPQEY
HKGRMASMVFHTFNQYKENGGVKLFKSHKEGYKDGEQLRDFVYLKDVVDVLYFLLTEKIE
SGVYNIGTGEARSFLDLSMATMRAASNNPELAQEEVIEFVPMPEDLRGRYQYFTQATMEK
LRRAGYVKKFHSLEDGVKDYVQNYMAKEDPYL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgattatagtaactggagcagctggaatgattggaagtgcatttgtctggaagctgaat
gaaatgggaatcaatgacattatagtagttgataaattcagaacagaagagaaatggctt
aatttaagaaaaagagattatgctgattgggtggatagagatgatctttttgaatggctt
tcaaatcctgcaaatgctgaaaaaataacaggagtagtacatatgggggcttgctctgca
acaacagagaaagatggagactaccttatgtcaaacaattatggatacagcaaaaaattg
tgggaattttgtgctgcaagacagataaattatgtctatgcttcatcagcagcaacttat
ggagctggagaacttggatataatgatgatgtaacacctgaagagttaaaaaaacttatg
cctttaaataaatatggatattctaaaaaaatatttgacgactgggcatttaaacaaaaa
atagctccaaaacaatgggcaggaactaaattctttaatgtatatggaccacaggaatat
cacaaaggaagaatggcttcaatggtattccatacattcaaccagtacaaagaaaatggt
ggagtaaaactttttaaatcgcataaagagggatataaagatggggaacagctaagagat
ttcgtttatttgaaagatgtagtagatgttctgtatttcttattgacagaaaaaatagaa
tctggagtatataatataggaacaggagaagctagaagtttcttggatttatctatggct
acaatgagagcagcatcaaataatcctgaacttgctcaggaagaagtaattgagtttgta
cctatgccagaggatttgagaggaagatatcaatatttcactcaggcaactatggaaaaa
ttaagaagagcaggatatgtaaaaaaatttcattcattagaagatggagtaaaggattat
gtacagaactatatggctaaagaagatccatacttatag
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