Fusobacterium ulcerans: C4N20_05950
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Entry
C4N20_05950 CDS
T05433
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ful
Fusobacterium ulcerans
Pathway
ful03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ful00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C4N20_05950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ful03000
]
C4N20_05950
03400 DNA repair and recombination proteins [BR:
ful03400
]
C4N20_05950
Enzymes [BR:
ful01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
C4N20_05950
Transcription factors [BR:
ful03000
]
Prokaryotic type
Helix-turn-helix
AraC family
C4N20_05950
DNA repair and recombination proteins [BR:
ful03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C4N20_05950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AVQ27639
UniProt:
A0AAX2JEQ1
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All DBs
Position
complement(1307101..1308561)
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AA seq
486 aa
AA seq
DB search
MLKDKKYAWYMAFKAKDVRFDGRFFVGVSSTKVYCRPVCRAKMPKFENCTFYSTAAEAEQ
AGYRPCLICRPELAPGTSVTDATASLLQRAVKTLEKECGNGDSIEETASHLGCTSRHLRR
AFATEYNVTPTQYLQTCRLLLAKSLLTDTNLSVLEVAISSGFGSLRRFNDVFKKQYKLVP
TALRKQGGNKKKQTDEITLALGYRPPYQWEHILNFLALRAIPGVETVKEGKYYRTVHFLN
GEKHIYSWIQAENQPEKNTIAVTMPAELLPVLSQVLAKVRNLFDLSCDPYAVYEGLMKMN
NIQPNICTLGIRVPGCFDPFEMSVRAVLGQQITIKAAKTLAARITEKFGVTIETGIEGLT
HIFPEPEDIYKLKDKITDSLGELGIIKTRAKTILELASAFVNKEIDFNFCIHPEEEIKKL
MKISGIGNWTAQYIAMRAMGLTDAFLETDYGVKKALPSYTPKEILTLAEAWRPWRSYAVV
NLWNSL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaagataaaaaatatgcatggtatatggcatttaaagcaaaagatgtcaggttt
gatggacgtttttttgtaggcgtatcatctacaaaggtatattgccgtccagtatgtaga
gcaaaaatgccaaagtttgaaaattgtactttttattcaacagcagcagaagcagaacag
gcgggatatcgtccatgtctgatatgcagacctgagcttgcaccaggaacttctgttaca
gatgcaacagcttctcttttacagcgagcagtaaaaacattagaaaaagaatgtggaaat
ggagacagtatagaggaaactgccagtcatcttggatgtacatctcgtcatcttcggagg
gcatttgcaacagaatataatgtgacaccaacacaatatttacaaacctgtaggctgctt
cttgcaaaaagtctgcttactgatacaaatttgtcggttcttgaagttgcaatatcttct
ggcttcggtagtttaagacgttttaatgatgtctttaaaaaacaatataagcttgtgcct
acagccttacgaaaacaaggaggaaataaaaagaaacaaacagatgaaataactttagca
ttaggatatcgccctccttatcaatgggaacatatattaaattttcttgctttacgtgct
attcctggagttgaaacagtaaaagagggaaaatattatcgcactgtacattttctaaat
ggagaaaaacatatatacagctggatacaggcagaaaatcaaccagagaaaaatactata
gcagttacaatgccagctgaacttctacctgtgctgtcacaagtactagctaaagttagg
aatttatttgatttatcctgtgatccatatgcagtatatgaaggactgatgaaaatgaat
aatatacagcctaatatctgtaccttaggcattcgtgttcctggatgtttcgatcctttt
gaaatgtcagtgagagcagttttagggcagcaaattactataaaggcagcaaaaacactg
gcagcaagaattacagaaaaatttggtgtaactattgaaactggaatagaaggattgact
catatttttccagaaccagaggatatttataagttgaaagataaaattactgattctctt
ggagaattaggaataattaaaacaagagcaaaaacaattttagaacttgcttcagcattt
gtaaataaggagatagattttaatttttgtattcatccagaagaggaaataaaaaaattg
atgaagatttcaggaataggaaactggacagcacaatatattgctatgcgtgctatggga
ttgactgatgcatttttagagacagattatggagtaaaaaaagcactgccatcatatact
ccaaaagaaatattgactttagcagaagcatggcgtccttggagaagttatgcagtggtt
aatttatggaattcattatga
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