Fusobacterium ulcerans: C4N20_09245
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Entry
C4N20_09245 CDS
T05433
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ful
Fusobacterium ulcerans
Pathway
ful03030
DNA replication
ful03430
Mismatch repair
ful03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ful00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C4N20_09245
03430 Mismatch repair
C4N20_09245
03440 Homologous recombination
C4N20_09245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ful03032
]
C4N20_09245
03400 DNA repair and recombination proteins [BR:
ful03400
]
C4N20_09245
Enzymes [BR:
ful01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C4N20_09245
DNA replication proteins [BR:
ful03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C4N20_09245
DNA repair and recombination proteins [BR:
ful03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C4N20_09245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
SSB
tRNA_anti_2
UBQLN1
Motif
Other DBs
NCBI-ProteinID:
AVQ28252
UniProt:
A0AAX2J6W7
LinkDB
All DBs
Position
1980215..1983640
Genome browser
AA seq
1141 aa
AA seq
DB search
MIKNFVHLHLHTEYSLLDGVGKIDDYLDRAKVLGMQAIAITDHGNLFGVLELYKKAMKKG
IKPVIGLEAYVSEFSMLEKDGRIFHLVLLAENNKGYQNLLKISSESYIKGFYYKPRIDKE
FLKNHSEGIIALSACMQGEIPRRILDNESEEKVDEIVNEYVDIFGKDNFYIEVQANGVKG
QTALNEKLYDLAQKHQLKMIATNDTHYVNEGEHTLQDILICVQTGAKVSDEKRMRIETDE
LFLKSREQIIDGLGAKYLEAVNNTVEIAERCNVDIEFGKFKFPDYKIPSCAKSIEEFLRK
LVYFGLSKRYPQGLTVTVLERVEYELSVIEKMGYAAYFVVVWDFIDYAKRNRIPIGPGRG
SAAGSLVAYALRITELDPLSYNLIFERFLNPERISMPDIDIDICQERRQEVIEYVIRKYG
EDKVAQIITFGTMKARAAIRDVGRVMDTSLSKIDSVAKLVPFNATIQQTLNNVEEFKNMY
LNDPEIQKVIDISARLENKVRHASVHAAGIVITKDPLTDTVPLYSDNKNKIVSTQYQMKE
LEDLGLLKMDFLGLRNLTNLQRAIDYIKEDLGEDIELSEIPLNSKKVYEMLSRGDTSGVF
QLESQGIRKILLKLKPDRFEDIIALLALYRPGPLGSGMVDDFINGKNGISEIIYPHPSLE
LTLKETYGVILYQEQVMKIANIMANYSLGEADLLRRAMGKKNVQIMEENREKFVERSMEN
GYTKEKAIEMFELIDKFAGYGFNKSHSAAYALIAYWTAYFKAYYMKHYYASLMTSEMSHV
EDIAFYMEDAKAHNMKLHLPDVNRASSKFRVDKEGIIFSLAAIKNVGEGVSAKILEECNE
NGDYKNFEDFVVRTRKHGLNKKALESLILAGALDSLPGNRKQKFESVDKILDYATRKIKE
DEIQQMNLFGEAKSSLGVFTLPQVPEYSLEELLAREKEYLGFYFSAHPLDNYRRLIEVYR
LSKISELKELKEEKSVQIFRTCGILREIKKIVTKKTGQIMCLFELEDYYEKINCVVFPKD
YAENAHIFMEGKTVYIEGTIQTDYFKGAETKKLIVRNIKFLDDIVRDKRLTAYILLKEED
RDKFSRLKKIILSYPGDTKLSFAIKTKTAKEIRATKYKIAPSRLFIDEIIDLIGIDKLTI
K
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaaactttgtgcatctgcatcttcatactgagtacagcctccttgatggagta
gggaaaatagatgattatttagacagagcaaaagttcttgggatgcaggcaatagctata
acagatcatggaaatctttttggagtgctggagctttacaaaaaggcaatgaaaaaagga
ataaaacctgtaattggtctggaagcttatgtatcagaattttctatgcttgaaaaagat
ggaagaatatttcatctggtgcttcttgctgaaaataataaagggtatcagaatcttctt
aaaataagttctgaaagttatataaagggattttattataagccgagaattgacaaggag
tttttaaaaaatcatagtgaaggtataatagcactttcagcatgtatgcagggagagatt
ccaagaagaatactggataatgagagtgaagaaaaagtagatgaaatagtaaatgaatat
gtagatatttttggaaaagataatttttatatagaagtacaggcaaatggagtaaaaggg
cagacagctctcaatgaaaaactttatgatctggctcaaaaacatcagttgaaaatgata
gcaacaaatgatacacattatgtaaatgaaggggagcatacacttcaggatattcttata
tgtgttcagacaggagcaaaggtgtctgatgaaaagagaatgaggatagagactgatgaa
ctttttcttaaaagcagagaacagataatagatggactgggagcaaaatatctggaagcg
gtgaataatactgttgaaatagctgaaagatgtaatgtagatatagagtttggtaaattt
aagtttccagattataaaataccatcttgtgcaaaaagtatagaagaatttttaagaaaa
ctcgtatattttggactttcaaagagatatcctcagggattaacagtaacagttttagaa
agagtggaatatgagctttcagttatagaaaaaatgggatatgctgcctactttgtagtt
gtatgggattttatagactatgccaaaaggaacagaataccaataggacctggaagagga
tcagcagcaggaagtctggtagcttatgctttgagaataacagaactagatccgttgagt
tataatctgatctttgagagatttttgaatcctgaaagaatatctatgccagatatagat
atagatatatgtcaggagagaaggcaggaagtaatagaatatgttatcagaaaatatgga
gaagataaagtagcgcagattataacatttggaacaatgaaagcaagagctgcaataaga
gatgtaggaagggttatggatacatctctttctaagatagacagtgttgccaagctagtt
ccatttaatgcaactatacagcagactttaaataatgtagaagaatttaaaaatatgtat
ctcaatgatcctgagatacaaaaagtaattgatatatcagcaagactggaaaataaagta
aggcatgcttctgtccatgctgctggaatagttataaccaaagatcctttaacagataca
gttccattgtatagtgataacaaaaataaaatagtttctacacaatatcagatgaaagaa
ctggaagatcttggattattgaaaatggacttccttggactgagaaatcttactaatctt
caaagggcaatagattatataaaagaagatttaggagaggatatagaattatcagagata
cctcttaattccaagaaagtatatgaaatgctttcaagaggagacacatctggagtattc
cagctggaatctcagggaataagaaagatattgttgaaattaaaaccagatagatttgaa
gatataatagccttgttggctctatacagaccaggacctttaggttcggggatggtagat
gattttataaatggaaaaaatggaatatcagaaataatttatccacatccatctcttgaa
cttacattgaaagaaacttatggggtaatactctatcaggaacaggtaatgaaaatagct
aatataatggcaaattattcattgggagaagcagatctgttaagaagagccatggggaaa
aagaatgttcagattatggaagaaaacagagaaaaatttgttgaaagatctatggagaat
ggatacacaaaagaaaaagcaatagagatgtttgagttaatagataagtttgctggatat
ggttttaataagtctcactcagcagcctatgctcttatagcttactggacagcatacttt
aaggcttattatatgaagcattattatgcttcacttatgacttcagaaatgagccatgtg
gaagacatagctttttatatggaagatgctaaagctcataatatgaaattgcatctccca
gatgtaaatagagcaagctcgaaatttagagtggataaagaagggataatattttctctt
gcagcaataaaaaatgtaggagaaggggtatcagcaaaaatacttgaagagtgtaatgaa
aatggagattataaaaactttgaagactttgtagttcgtacaagaaaacatggcttaaat
aagaaagcgttggaatctcttatattggcaggtgcactggacagtcttccagggaacaga
aagcaaaaatttgaatcagtagacaagatactggattatgcaacaagaaaaataaaagaa
gatgaaatacaacagatgaatctttttggagaagctaaatcttctcttggagtttttact
cttccacaggtacctgaatattctctagaagagcttttggcaagggaaaaagaatatctt
ggattctatttcagtgctcatcctttggataattacagaaggctgatagaggtgtacaga
ctttctaaaatatcagaactaaaagaactgaaagaggaaaaaagtgtgcagattttcaga
acatgtggtatacttagagagataaaaaaaatagttacaaaaaaaaccggacaaataatg
tgcttgtttgaattagaggactactatgaaaaaataaattgtgtggttttcccaaaagat
tatgcagaaaatgctcatatatttatggaaggaaaaactgtatatatagaaggaactatt
cagacagattatttcaaaggggcagagactaaaaagctgattgttagaaatataaaattt
ttagatgatatagtgagggataagagacttacagcttatatacttttgaaagaggaagat
agagataaattcagcaggttgaagaaaataattctttcttaccctggagatacaaagctg
agctttgcaataaaaacaaaaacagctaaggaaataagagctacgaaatataaaatagct
ccttcaagattgtttatagatgaaatcatagatttgatcggaatagataagctcactata
aaataa
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