Fusobacterium ulcerans: C4N20_13860
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Entry
C4N20_13860 CDS
T05433
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ful
Fusobacterium ulcerans
Pathway
ful03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ful00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C4N20_13860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ful03400
]
C4N20_13860
Enzymes [BR:
ful01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
C4N20_13860
DNA repair and recombination proteins [BR:
ful03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
C4N20_13860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
PRMT5_TIM
Motif
Other DBs
NCBI-ProteinID:
AVQ29125
UniProt:
A0AAX2J9J0
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All DBs
Position
3015084..3015956
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AA seq
290 aa
AA seq
DB search
MKRTREEKIARKFIGAHVSTVGGPFNAPKNAKEIGARAFGMFVKNQRRWEAKPLTDEDIE
KFKKALKEYSYTNEYILPHDSYLINLGSKDEEKREKSLNAFIEEIKRCDQLGLKYLNTHP
GSHLNEITEDECIANIAECINKAIDATENIVIVLENTSGQGSNMGYKFEHLGKIIEKIKN
KERIGACIDTCHTITAGYELKDEAGYKKTMDEFEKYVGFKYLKGVHLNDSKFDTGSKKDR
HDSIGKGILGMEFFERFMNDERFDNIPIILETIDSSIWKEEINLLYSLIK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaacaagagaagaaaaaattgcgagaaaatttataggtgctcatgtcagcaca
gtaggtggacctttcaacgctcctaaaaatgcaaaagaaataggagcaagagcctttgga
atgtttgttaaaaatcaaagaagatgggaagccaagccattaactgatgaagacatagaa
aaattcaaaaaagctttaaaagaatacagctacactaatgagtatatacttcctcatgac
agttatcttataaatctaggttcaaaagatgaagagaagagagaaaaatctctaaacgct
tttattgaagagataaaaagatgtgatcaattaggattgaaatacctaaacactcaccct
ggaagccacctaaatgaaataactgaagatgaatgtatagctaatatagcagaatgtata
aacaaagctattgatgctacagaaaatatagttattgtactggagaatacatctggtcaa
ggttcgaatatgggatataaatttgaacatttaggaaaaattattgaaaaaataaaaaat
aaagaaagaataggagcttgtattgatacttgccatacaataactgctgggtatgaatta
aaagatgaagcaggttataaaaaaactatggatgagtttgaaaaatatgttggttttaaa
tatcttaaaggagtacatcttaatgactctaaatttgatactggaagtaaaaaagataga
catgacagtataggaaaaggaatattaggaatggaatttttcgaaagatttatgaatgat
gaaagatttgataatatccctattatattggaaactattgatagttctatctggaaagaa
gaaataaaccttttatatagtcttatcaaataa
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