Fundidesulfovibrio sp. YSD1: YSD1_02200
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Entry
YSD1_02200 CDS
T11982
Name
(GenBank) DEAD/DEAH box helicase
Organism
fun Fundidesulfovibrio sp. YSD1
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Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SNF2_assoc
Helicase_C
ResIII
ERCC3_RAD25_C
HDA2-3
Helicase_dom
Motif
Other DBs
NCBI-ProteinID:
BGX37964
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Position
220789..224010
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AA seq
1073 aa
AA seq
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MALTSEESKAKQILQEFVRETIPEYIIDGSHSIVAQDGVQKIDVKKREQYWDVEGQVQGD
DFQVYTSELGLNLEDETVTFFCNCPESFSGVCRHVGATALKFVKSLEGRKSQDSQAEAAQ
NVEWRQTFRHFFATAFEPEAGKHYVIYRFHPEPGRLQVAFFRGRQNKSGLSQVHQEITLE
QIIQNPDWCETSPSLPLVAEQIGHFLDYRGHRVDIPAGLISWFLWSIGKEYYLYWQDTEH
PVRIERSTMRLQLRPVMDEAQGLRFDIYLARPGKAPFAIQGQETFFYGQLPLWVCWNKSF
YPVQTGLPAPFIREMVENPPLVPSGDVSEFLDRVWTKFPASDLHGQQEFLDRMKPSFLPA
RYNPKLYLDEEGSLLTLQVQNVYETEHGEVFQEGPNPELQTGSYSFEGKSFLMAREQEAE
AALIAVLQEMGFQPRNNANWFLEPEEAIVFLLDAYPKLVEKYRVFGEKNLTRYKVRLSQP
VIVAEVESNEKENWFDLDLAVQYDDQKVPIEKIWKAWTQGKRYVQLKDGSYTSLPESWLK
RIGHKLRALGYDADKPPQKRFKQFEAPVLDKILEDLPEAHTDSFWNSLREKIHSFKEIVP
LKQPAHLNASLRPYQLQGLSYLNFLREYGFGGILADEMGLGKTVQTLSFIQHMVDKGSRA
PNLIVVPTSVLPNWDREAEKFVPRLTRLIVYGAKREGLFKKIAESNLVITTYALLRRDLD
ELLNFEFSTIILDEAQNIKNPNTITARSVRRLRGKMRLCLSGTPIENNLFELWSLFEFLM
PGFLGSQNSFQRGIVKPIKDGDEETLDYLRGRVKPFILRRTKSEVAKDLPPKVENVQYCA
LIDEQAELYSQLAKKLRDQVLKDVDEKGMAKSQMSILDALLKLRQICCHPRLLKLDMPGV
NTNLPSGKFDTFKDLVTDIVEEGHKVLVFSQFVQMLHIIRSWLQINQTPFAYLDGSSKDR
FEQVDRFNNTPEIPIFLISLKAGGTGLNLTSADYVIHYDPWWNPAVENQATDRTHRIGQK
RQVFAYKLICSNTVEEKILKLQDMKKGVAEAIIPGQDAWKSLTRNDLEMLFEV
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggccctcaccagcgaggagagcaaagccaagcaaatcctccaggaattcgtccgggag
acgattcccgaatatatcattgacggctcgcattcaatcgtcgcgcaggacggcgtccag
aaaatcgacgtcaagaagcgcgaacagtactgggatgtggaggggcaagtccagggggat
gatttccaggtctacacgtccgaactggggctgaacctcgaggacgagaccgtcaccttc
ttctgcaactgccccgagtcgttctccggagtgtgccgccacgtgggggccaccgcgctc
aagttcgtgaaaagcctggagggccgcaagagccaggacagccaggccgaggcggcccag
aacgtggagtggcgccagaccttcaggcatttcttcgccacggccttcgagcccgaggcg
ggcaagcactacgtcatctaccgcttccaccccgagcccggccggctccaggtggccttc
ttccggggccgccagaacaagtccgggctctcccaggtgcaccaggagatcaccctcgag
cagatcatccagaacccggactggtgcgagacctcgcccagcctgccgctcgtcgccgag
cagatcggccacttcctggactaccggggccaccgggtggacatcccggccgggctcatc
tcctggttcttgtggtccatcggcaaggagtactacctctactggcaggacaccgagcac
ccggtgcgcatcgagcgctccaccatgcgcctgcagctgcgcccggtgatggacgaggcc
cagggcctgcgcttcgacatctacctggcccgccccggcaaggcccccttcgccatccag
ggccaggagaccttcttctacggccagctgcccctgtgggtctgctggaacaagagcttc
tacccggtgcagaccggcctgcccgcgcccttcatccgcgagatggtggagaacccgccg
ctggtgccctcgggcgacgtctcggaatttttggaccgggtctggaccaagttccccgcc
tcggacctgcacggccagcaggaattcctcgaccgcatgaagccgagctttttgcccgcc
aggtacaatccgaagctctacctggacgaggaaggcagcctgctcacgctccaggtgcag
aacgtctacgagaccgagcacggcgaggtcttccaggaaggccccaaccccgaattgcag
acaggctcctactccttcgagggcaagagcttcctcatggcccgcgagcaggaggccgag
gcggcgctcatcgccgtgctgcaggagatgggcttccagccgcgcaacaacgccaactgg
tttttggagcccgaggaagccatcgtcttcctcttggacgcctaccccaagctcgtggag
aagtaccgcgtcttcggcgagaagaacctcacccgctacaaggtgcgcctctcccagccg
gtgatcgtggccgaggtggagtccaacgagaaggagaactggttcgacctggacctggcc
gtgcagtacgacgaccagaaggtgcccatcgagaagatctggaaggcctggacccaggga
aagcgctacgtgcagctcaaggacggctcctacacgagcctgcccgagagctggctcaag
cgcatcggccacaagctgcgcgccctgggctacgacgcggacaagccgccccagaagcgc
ttcaagcagttcgaggccccggtgctggacaagatcctcgaggacctgcccgaggcccac
accgactctttctggaacagcctgcgcgaaaagatccacagcttcaaagagatcgtgccg
ctcaagcagcccgcgcacctgaacgccagcctgcgcccctaccagttgcagggcctcagc
tacctgaacttcctgcgcgagtacggcttcggcggcatcctggccgacgagatgggcctg
ggcaagaccgtgcagacgctctccttcatccagcacatggtggacaagggctcgcgcgcg
cccaacctgatcgtggtgcccacctcggtgctgcccaactgggaccgcgaggccgagaag
ttcgtgccccggctcacccggctgatcgtctacggggccaagcgcgaagggcttttcaag
aagatcgccgaatcgaacctggtgatcaccacctacgcgctcctgcgccgcgacctggac
gagctgctcaacttcgagttcagcaccatcatcctggacgaggcccagaacataaagaac
cccaacaccatcacggcgcgctccgtgcgcaggctcaggggcaagatgcgcctttgcctc
tcgggcacgcccatcgagaacaacctcttcgagctctggagcctgttcgagttcctcatg
cccggtttcctgggcagccagaactccttccagcgcggcatcgtcaagcccatcaaggac
ggcgacgaggagacgctcgactacctgcgcggccgcgtgaagcccttcatcctgcgccgc
accaagtccgaggtggccaaggacctgccgcccaaggtggagaacgtccagtactgcgcg
ctcatcgacgagcaggccgagctctactcccagctggccaagaagctgcgcgaccaggtg
ctcaaggacgtggacgagaagggcatggccaagtcgcagatgtccatcctggacgcgctg
ctcaagctccgccagatctgctgccaccccaggcttctgaagctcgacatgcccggcgtg
aacaccaacctgccctcgggcaagttcgacaccttcaaggacctggtcacggacatcgtg
gaggaaggccacaaggtgctggtgttctcgcagttcgtgcagatgctgcacatcatccgc
agctggctgcagatcaaccagacgcccttcgcctacctggacggctccagcaaggaccgc
ttcgagcaggtggaccgcttcaacaacaccccggaaatccccatcttcctgatctcgctc
aaggcgggcggcacgggcctcaacctgaccagcgcggactacgtgatccactacgacccg
tggtggaacccggccgtggagaaccaggccacggaccgcacgcaccgcatcggccagaag
cgccaggtgttcgcctacaagctgatctgctccaacaccgtggaggagaagatactgaag
ctccaggacatgaagaaaggcgtggccgaggccatcatccccggccaggacgcctggaag
agcctgaccagaaacgacctggagatgctcttcgaggtctag
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