Fundidesulfovibrio sp. YSD1: YSD1_12610
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Entry
YSD1_12610 CDS
T11982
Symbol
topA_1
Name
(GenBank) type I DNA topoisomerase
Organism
fun Fundidesulfovibrio sp. YSD1
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Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Ribosomal_aS21
Toprim_4
DUF7340
HMBD
NRDD
Motif
Other DBs
NCBI-ProteinID:
BGX39005
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Position
complement(1375967..1377970)
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AA seq
667 aa
AA seq
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MKLLIVESPGKVSKLKGFLGQGWDVLASVGHVRDLPEKEIGVGAPDFRPTYTPTERGRSV
LARLTKAVKAADEVYLATDPDREGEAIAWHLKDALKLQNERRVTYTEITEKAVKAAVAKP
RHLDMNLVAAQEARRVLDRLVGYLVPRPLGNLLGGKRPAGRVQTPALRLIVERERDIRDH
RVTTHFGVELVFDTLPNISQGWKAIWMVKEWLPEGQEYILDKELATKIAAVRRVVVLSCK
DSKSSSAPPAPFTTSTLQQAASNALKLSPKETMGAAQKLYEGGHITYMRTDSPNLSVEAV
AEIQEFCRSQGWPIVTKPRSWKSKSGAQEAHEAIRPTHVEVAVAGETDTEKALYDLIRRR
TLASQLEDALFAVREVVLQGEAVSGKTPVFEARGRTLLKPGWKVVMATDQADESEEEPEN
PVPSLKEGGQLAVKEGLVLTKKTKPRPRYTEAALVKALENSGIGRPSTYAAILAKLVDHG
YVRLEKRVLVPTPEGEAVIGALVGKFAFLEYAFTQGMEEDLDAVAEGKAKYLDTVRKFYG
SFEMELRAFQAALPSFPCPDCGKPLVHRVKAGPKGYDFWGCSGYPDCTANFFPDGDKPGR
RKEKQGKPSLSEHKCPDCGKALVHRVKNGDGGYNFWGCSGFSREGNSCRATFNDAGGKPG
SRQEARK
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcttgattgtcgaatctcccggtaaggtgtccaagctcaaaggcttcctcgga
cagggctgggatgtcctggccagcgtcggccacgtgcgcgacctccccgaaaaggaaatc
ggggtgggcgcgcctgacttccgccccacctacaccccgacagaacgcggcaggtcggtg
ctggccaggctgaccaaggccgtgaaggcagccgacgaagtgtacctggccacggacccc
gaccgtgaaggtgaggccattgcctggcatctcaaggacgccctcaagctccagaacgaa
cggcgcgtgacctacaccgaaatcacggaaaaggcggtcaaggcggcagtggcaaaaccc
cgtcacctggatatgaacctggtcgccgcgcaggaggcccgccgcgtgctggatcgtctc
gtgggctacctggttccccgtcccctggggaacctcctggggggcaagcgacccgccggg
cgcgtgcaaaccccagcgttgcggttgatcgtcgagcgcgagcgcgacatccgggaccat
cgcgtcaccacgcatttcggcgtggagctggtcttcgacaccctgcccaacatttcccag
ggctggaaggccatctggatggtcaaggagtggctgcccgagggccaggaatacatcctg
gacaaggagctggccaccaagatcgcggccgtccggcgggtggtcgtgctctcatgcaag
gactccaaaagcagctcggcccctcctgccccgttcaccacctccactctgcaacaggcc
gcctcgaacgcgctcaagctctcacccaaggagaccatgggtgcggcgcagaaactctat
gagggcgggcatatcacctacatgcgcaccgactcgcccaacctgagcgttgaggctgtt
gccgaaatccaggaattttgccgaagccagggttggccaatcgtgaccaagccacgctcc
tggaagagcaagtccggcgcgcaggaagcccacgaggccattcggcccacgcacgtcgag
gtggcggtcgcgggcgaaaccgacaccgagaaggccttgtacgacttgatccggcggcgg
accctggccagccagctcgaagacgcacttttcgccgtccgcgaggttgtgctccagggg
gaagcggtgagcggcaaaacgcccgtgttcgaggcgagggggcggaccctgctcaagcca
ggctggaaggtggtcatggccacggaccaggccgatgaatccgaagaggagccggagaac
ccggtcccctccctcaaggagggtgggcagctcgccgtcaaggagggtctggtcctgacc
aagaagaccaagccccgtccgaggtacacggaagccgccctggtgaaggcccttgagaac
agcggcattggccgtccatcgacctatgcggccatcttagccaagctcgtggaccacggg
tatgtccgtctcgaaaagcgcgtcctggtgcctacacccgaaggggaggccgtgattggc
gcgttggtcggcaagttcgccttcctggagtacgccttcacccagggcatggaagaggat
ctggacgctgttgccgagggcaaggccaagtacctcgataccgtgcggaagttctacggc
tccttcgagatggagctccgggcgttccaggctgcccttccaagcttcccgtgtcctgac
tgcgggaagcccctggtccaccgggtcaaggccggtcccaaggggtatgatttttggggc
tgttcgggctacccggactgcacggccaacttctttccggacggcgacaagcccgggcgg
cgcaaggagaagcagggaaaaccctctctcagcgagcacaagtgtccggactgcggcaag
gctttggtccaccgggttaagaacggcgacggcggatacaacttctggggctgttcgggt
ttttcccgagaagggaatagctgccgtgctaccttcaatgacgcagggggcaagcctggc
tcccgccaggaggctcggaaatga
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