Fusobacterium animalis 4_8: HMPREF0409_00403
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Entry
HMPREF0409_00403 CDS
T02680
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fus
Fusobacterium animalis 4_8
Pathway
fus03420
Nucleotide excision repair
fus03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HMPREF0409_00403
03430 Mismatch repair
HMPREF0409_00403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fus03400
]
HMPREF0409_00403
Enzymes [BR:
fus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF0409_00403
DNA repair and recombination proteins [BR:
fus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF0409_00403
MMR (mismatch excision repair)
Other MMR factors
HMPREF0409_00403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
SLFN-g3_helicase
UvrD_C
AAA_19
UvrD_C_2
DUF3801
NPHP3_N
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AGM23777
UniProt:
R9RD27
LinkDB
All DBs
Position
1384721..1387093
Genome browser
AA seq
790 aa
AA seq
DB search
MSEIILSNEQISVARYSENGVIRVNGGPGSGKTLVAVKRAIFLAKDYKYAEKEDKILFLF
YNKSLKNTVQKLFNSDENYKEVKDKIEIESIDSFFVKEYLNKLNEEFLTFLKSAKNNKDF
KRSFEEDRKERIEGILNLRKDEFKRFSPKDTEFVLSEIDWLRNCCYTKKEEYIETSRLGR
GNQPKLSKTDKEEIYKILDLYRGSRERTLRYTDFYDIALLFLFYYEKEENRGKIKKYNHI
IVDEAQDLSKIHFRFINLICEISKISGNTMSLFMDKNQSIYSAQAWIYGSRTLKQVGINI
NKSFNLNRAYRNVKEIFDVAKKLVPEMKLDEDNSNAKNKNLTLTFSVDRGIKPFYIKYSA
PEDRLENLCRNIKILVAEFNYKYDDISIIALKDKNMKEIEKYLKKYSIQYIRKNKSINSN
AVNITTYYSSKGTENKVIFIPNIDELSPDDLVEFYPDKTSYEILDELRKLLYIGMTRATE
VLVMSSLKEENEYLKDLLNVFNFEKDFISIDSDTNDFYNVFNSEINKNENIEKNINKFTE
IKEVVKEEKISDIAIKNELENLKVVDTNDKIVKIEEQVEEAFPLAQKSTKIGLIKAEKLF
LRADKEDEYLGTEAFEYLKSLECEIRTYYVTIHEKYIKDNYNKNEKLSIILNELKDYTEF
KTAIKDCLKYKVFDERNDLAHEYNEYNYDNLLKVRELVREKLLPKFIKAFKKFNTNKEIE
EFVIIGRLETEYNKVDIKRKKYYTYYIVDEENNEFPAFSINKYEQNKTYKLSCNKLMLKG
NEYYRIVSAF
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaataattttatctaatgagcaaatatctgttgctagatattcagaaaatggg
gttattagagttaatggtggaccgggtagtggaaaaactttggttgcagttaaaagagct
atctttttagcaaaagactataaatatgcagaaaaagaggataaaattctatttcttttc
tataataaaagtttgaaaaatactgtacaaaaactattcaattcagatgaaaattataaa
gaagtaaaagataaaattgaaatagaaagtatagatagtttttttgttaaagagtatttg
aataaactcaatgaagaatttcttacatttttaaaaagtgcaaaaaataataaggatttt
aagagatcatttgaagaggatagaaaagaaagaatagaaggtattttaaatttaagaaaa
gatgaatttaaaagattttctcccaaagacaccgaatttgttttaagtgaaatagattgg
ttaagaaattgttgttatacaaaaaaagaggaatatattgaaacttcaaggcttggtaga
ggtaatcaaccaaaattaagtaagacagataaagaggaaatctataagatactagattta
tacagaggtagtagagaaagaactttaaggtatacagatttttatgatattgccttatta
tttttattctattatgaaaaagaggagaatagaggaaaaataaaaaaatataatcacatt
atagttgacgaagcacaagatttatctaagatacattttagatttatcaatttaatatgt
gaaatttcaaaaatttctggaaatacaatgtcattatttatggacaaaaatcaaagtata
tattcagctcaggcttggatatatggaagtagaactttaaaacaagtaggaattaatatt
aataagagttttaatctaaatagagcatatagaaatgtaaaagaaatctttgatgtagca
aaaaaattagtgcctgaaatgaaacttgatgaggataattcaaatgctaagaataaaaat
ttaactttaacttttagtgtagatagaggaataaaacctttttatataaaatattctgct
cctgaggacagattagaaaatttatgtaggaatataaaaattttagtggctgagtttaat
tataaatatgatgatatttctatcattgcattaaaagataaaaatatgaaagagatagag
aaatatttaaaaaaatactcaatacaatatattagaaaaaataaatctataaactcaaat
gctgtaaatattacaacttattattcttcaaaaggtacagaaaataaggtaatttttatt
cctaatatagatgaattaagtcctgatgatttagttgaattttaccctgataagacaagt
tatgaaatattagatgagctaagaaagttattgtatattggaatgacaagagcaacagaa
gtgttggttatgtcttctttaaaagaagaaaatgaatatttaaaagatttattaaatgta
ttcaattttgaaaaagattttatcagtattgattcagatactaatgatttttataatgtt
tttaattctgaaataaataaaaatgaaaatatagagaaaaatatcaataaatttacagaa
attaaagaggttgtaaaagaagaaaaaataagtgatatagctattaaaaatgaattagaa
aatttaaaagttgttgatactaatgataaaattgtaaaaattgaggagcaggtagaagag
gcatttcctttggcacaaaaatctacaaaaataggtttaattaaggctgaaaaacttttt
ttaagagcagataaagaagatgaatatttaggaactgaggcttttgagtatttaaagtct
cttgaatgtgaaataagaacttattatgtaacaatacatgaaaaatatataaaagataat
tataataagaatgaaaaactttctattatattaaatgaattaaaagattatactgaattt
aaaactgctataaaagattgtttaaaatataaagtgtttgatgaaagaaatgatttagca
catgaatataatgagtataattatgataatttacttaaagttagagaattggttagagag
aaactacttccaaaatttataaaagcatttaaaaagtttaatacaaataaagaaatagaa
gaatttgtcattattggaaggcttgaaacagaatacaataaagtggatataaaaagaaaa
aaatattatacttactatattgtagatgaagaaaataatgaatttcctgctttttctata
aataaatatgaacaaaataaaacttataaattatcatgcaataagttgatgttaaaggga
aatgaatattacagaatagtttcagcattttaa
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