Fusobacterium animalis 4_8: HMPREF0409_00469
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Entry
HMPREF0409_00469 CDS
T02680
Name
(GenBank) chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fus
Fusobacterium animalis 4_8
Pathway
fus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF0409_00469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fus03019
]
HMPREF0409_00469
03110 Chaperones and folding catalysts [BR:
fus03110
]
HMPREF0409_00469
03029 Mitochondrial biogenesis [BR:
fus03029
]
HMPREF0409_00469
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fus04147
]
HMPREF0409_00469
Enzymes [BR:
fus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HMPREF0409_00469
Messenger RNA biogenesis [BR:
fus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HMPREF0409_00469
Chaperones and folding catalysts [BR:
fus03110
]
Heat shock proteins
HSP60 / Chaperonin
HMPREF0409_00469
Mitochondrial biogenesis [BR:
fus03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HMPREF0409_00469
Exosome [BR:
fus04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HMPREF0409_00469
Exosomal proteins of other body fluids (saliva and urine)
HMPREF0409_00469
Exosomal proteins of breast cancer cells
HMPREF0409_00469
Exosomal proteins of colorectal cancer cells
HMPREF0409_00469
Exosomal proteins of bladder cancer cells
HMPREF0409_00469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-ProteinID:
AGM23709
UniProt:
R9RBY0
LinkDB
All DBs
Position
complement(1300730..1302349)
Genome browser
AA seq
539 aa
AA seq
DB search
MAKIINFNDEARKKLEIGVNTLADAVKITLGPRGRNVVLEKSYGAPLITNDGVTIAKEIE
LEDPFENMGAALVKEVAIKSNDVAGDGTTTATILAQAIVKEGLKMLSAGANPVFLKKGIE
LAAKEAIEVLKDKAKKIESNEEISQVASISAGDEEIGKLIAQAMAKVGETGVITVEEAKS
LETTLETVEGMQFDKGYVSPYMVTDSERMTAELDNPLILLTDKKISSMKELLPLLEKTVQ
MSKPVLIVADDIEGEALTTLVINKLRGTLNVVAVKAPAFGDRRKAILEDIAILTGGEVIS
EEKGMKLEEATIEQLGKAKTVKVTKDLTVIVDGGGQQKDISARVNLIKAQIEETTSDYDK
EKLQERLAKLSGGVAVIKVGAATEVEMKDKKLRIEDALNATRAAVEEGIVAGGGTILLDI
IESMKDFNETGEIAMGIEIVKRALEAPIKQIAENCGLNGGVVLEKVRMSPKGFGFDARNE
KFVNMIESGIIDPAKVTRAAIQNSTSVASLLLTTEVVIANKKEEEKAPMGAGGMMPGMM
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaattataaattttaatgatgaagctagaaaaaaattagaaattggggttaat
acacttgcagatgcagtaaaaattacattaggaccaagaggtagaaatgtagttcttgaa
aagtcttatggagcacctttaattactaatgatggtgttacaatagcaaaagaaattgaa
ttggaagatccatttgaaaatatgggtgcagcattagttaaagaagttgctattaaatca
aatgatgttgcaggagatggaacaacaacagctacaatcttagcacaagctattgttaaa
gaaggattaaaaatgttgagtgctggtgcaaatccagttttcttaaagaaagggattgaa
cttgctgcaaaagaagctattgaagttttaaaagataaagctaaaaaaattgaatctaat
gaagaaatttcacaagttgcatcaatttcagctggtgatgaagaaataggtaaattaatt
gctcaagctatggcaaaagttggtgaaacaggcgtaataactgttgaagaagctaagtct
ttggaaacaactttagaaactgttgaaggaatgcaatttgataaaggatatgtttctcca
tatatggttacagattctgaaagaatgacagcagaacttgataatcctttaatcttatta
acagataaaaagatttcttcaatgaaagaattattacctttgcttgaaaaaactgtgcaa
atgtctaagccagttttaattgtagctgatgatattgaaggagaagctctaacaactctt
gttataaataaattaagaggaactttaaatgttgttgctgttaaagctcctgcttttgga
gatagaagaaaagctatacttgaagatattgctattctaactggtggagaagttatatca
gaagaaaagggaatgaaattagaagaagctactatagaacaattaggaaaagctaaaact
gttaaagttacaaaagacttaactgtaattgttgatggtggcggacaacaaaaagatata
tctgccagagttaatttaataaaagctcaaatagaagaaacaacttctgattatgataaa
gaaaaattacaagaaagacttgcaaaattatctggtggagttgctgtaataaaagttgga
gctgccacagaagttgaaatgaaagataaaaaattaagaatagaagatgctttaaatgct
acaagagcagctgttgaagaaggaatagttgcaggtggaggaactatcttacttgatatc
attgaatcaatgaaagatttcaatgaaactggtgaaatagctatgggtattgaaattgtt
aaaagagctttggaagcacctataaaacaaatagctgaaaactgtggattaaatggtgga
gtagttttagaaaaagtaagaatgtctccaaaaggttttggctttgatgctagaaatgaa
aaatttgtcaatatgatagaatctggaattattgatccagcaaaagttacaagagctgct
atacaaaattctacttctgttgcatctttacttctaacaacagaagttgtcattgcaaat
aagaaggaagaagaaaaagctccaatgggagctggtggaatgatgccaggaatgatgtaa
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