Fusobacterium animalis 4_8: HMPREF0409_00910
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Entry
HMPREF0409_00910 CDS
T02680
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
fus
Fusobacterium animalis 4_8
Pathway
fus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF0409_00910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fus03019
]
HMPREF0409_00910
Messenger RNA biogenesis [BR:
fus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HMPREF0409_00910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Mei4
PDEase_II
Cas_CT1975
Motif
Other DBs
NCBI-ProteinID:
AGM23274
UniProt:
R9RAV1
LinkDB
All DBs
Position
842517..844412
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AA seq
631 aa
AA seq
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MKKEKQGKQTQLRNNKISIRDKIMSIKDDVLNLKSKKVKNKVVKKVAEKEKKKKEEIQKV
EVIQNNSKKVKTSKKDLDKMYVIPLGGLEEVGKNCTIIQYKDEIIIVDAGAIFPDENLPG
IDLVIPDYTFLENNKSKIKGLFVTHGHEDHIGGIPYLYEKIDKSTAIYGGKLTNALIKSK
FENFGVKKDLPKMVEVGSRSKVSVGKYFTVEFVKVTHSIADSYSLSVKTPAGHVFLTGDF
KIDLTPVDNEKVDFVRLSELGEEGVDLMLSDSTNSEVEGFTPSERSVGDAFRQEFQKATG
RIVVAVFASHVHRIQQIIDTAAQFKRKIAIDGRSLLKVFEIAPSVGRLTIPENLLIPISS
VDKYDDDEIVILCTGTQGEPLAALSRIAKNMHKHIALREGDTVIISSTPIPGNEKAVSTN
INNILKYDVDLVFKKIAGIHVSGHGSKEEQKLMLNLINPKHFMPVHGEYRMLKAHMRSAI
ETGVPKDKILLTQNGDKVEVTKEYAKINGKVNSGEILVDGLGVGDIGSKVIKDRQQLSED
GIVIVAYSIDKNTGKIVSGPEMSTKGFVYYKDSEDTIKEAQDLLGKKISKNETYLGRDWA
DLKGNVRDLLSRFFYEKLKRNPIILPMLLEI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagagaaacaggggaaacaaacacagttgaggaacaacaaaattagtattcgt
gataaaataatgagtattaaagatgatgttttaaatttaaaaagtaaaaaagttaaaaat
aaagtagttaaaaaagtggctgaaaaagaaaaaaagaaaaaagaagaaatacaaaaagtt
gaagtgattcaaaataatagcaaaaaagtgaaaacttcaaaaaaagatttggataaaatg
tatgttatcccgctaggtggtttagaagaagttgggaaaaactgtactataattcagtat
aaagatgaaataattattgtagatgcaggagcaatatttccagatgaaaatttacctggt
atagatttggtgattccagactatacttttttggaaaataataaatctaaaataaagggt
ttatttgtaactcatggacatgaggatcatattggaggaataccttatctgtatgaaaaa
atagataaatctactgctatttatggtggaaaattaacaaatgctttaataaaatctaag
tttgaaaattttggagtaaaaaaagatttaccaaaaatggttgaagttggttcaagaagt
aaagtgagtgtaggaaaatattttacagttgaatttgtaaaagtaacacattcaatagca
gattcttattctttatctgtaaaaacaccagcagggcatgtatttttaacaggagatttt
aaaatagacttaactcctgttgataatgaaaaagtagatttcgtgagattatcagaatta
ggagaagaaggagtagatttaatgctatcagactctactaactctgaggttgaaggtttt
accccatctgaaagaagtgttggggatgcttttagacaagaatttcaaaaagctactgga
agaatagttgtagctgtatttgcctcacatgttcatagaatacaacaaattatagataca
gcagcacaatttaaaagaaaaattgctattgatggaagaagtttattgaaagtgtttgaa
atagcacctagtgttggaagattaactatacctgaaaatttacttattcctatatcatca
gttgataaatatgatgatgatgaaattgtaatattatgtacaggaacacaaggagaacca
ttagctgcactttcaagaatagctaaaaatatgcataaacatatagctttaagagaagga
gatactgtaataatttcatctacacctataccaggaaatgaaaaagcagtttcaactaat
ataaataatattttaaaatatgatgttgatttagtttttaaaaagattgcaggtatacat
gtgtcaggacatggaagtaaagaagaacaaaaattgatgttaaatttaataaatccaaaa
cattttatgccagttcatggtgaatatagaatgcttaaagctcatatgagatctgcaatt
gaaacaggagttcctaaggataaaattcttttaactcaaaatggagataaagtagaagtt
accaaagaatatgcaaaaataaatggtaaagtaaattctggtgaaattctagttgatgga
ttaggtgttggagatattggaagtaaggttataaaagacagacaacaactatcagaagat
ggtatagtaatagttgcttattctattgataaaaatacaggaaaaatagtttcaggacct
gaaatgtcaacaaaaggttttgtatactataaagattcagaagatactataaaagaggca
caggatttattaggtaaaaaaataagtaaaaatgaaacttacttaggtagagattgggca
gatttaaaaggaaatgtaagagatttactatcaagatttttctatgaaaaattaaagaga
aatccaattattttacctatgttattagaaatataa
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