Fusobacterium animalis 4_8: HMPREF0409_01469
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Entry
HMPREF0409_01469 CDS
T02680
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fus
Fusobacterium animalis 4_8
Pathway
fus03420
Nucleotide excision repair
fus03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HMPREF0409_01469
03430 Mismatch repair
HMPREF0409_01469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fus03400
]
HMPREF0409_01469
Enzymes [BR:
fus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF0409_01469
DNA repair and recombination proteins [BR:
fus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF0409_01469
MMR (mismatch excision repair)
Other MMR factors
HMPREF0409_01469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C_2
UvrD_C
AAA_30
DEAD
ddrB-ParB
Motif
Other DBs
NCBI-ProteinID:
AGM22723
UniProt:
R9R9L7
LinkDB
All DBs
Position
281815..283716
Genome browser
AA seq
633 aa
AA seq
DB search
MDTRILEDEVNTALQCIEKGENFILEGGAGSGKTYSLILLIETLIIKLPEIKIVCITYTN
NAVAEIKSRIDNENLWVSTIHEFIWYIIKKYQKEIKNELVLLINNETIKSFKKPKDLENN
LITIDYFNNIDVEYDEYYSMNPNENKVKISHDHILILAEKMFDRYKKLSDILKDVANCIF
VDEYQDTSPYITKILLEHLKKSKKKNVIGFFGDSMQSIYDEGVGDLNKYKLKKIVKKQNR
RNPRIVIEIANKFRDDKITQVPSKDKNAPNMDENGVIIEGNIKFIYGKEQEDINFLKNKA
LFKSWNFLNGEQTRELRLTHKYNAEMAGFKKLYDLYNDDLIIKLIDNIQKNIDNNENKES
ILDELVLKLRPTYNRKDLFEEIIGNEIYKSIYQNIKNLVWKDALEKCKISKESLMSYKFN
GINGRYETNSHRDKILKKLDVLNELIELYESKKFNEFLKKTNFSIQNKNDKSKLKELMNF
LIFEDEKTIEEVLDFSKKQGLIKEDMNFDNYISVKGFYLWERIKKISFKEYRNSILYLKE
FSPISTQHSIKGSEFDNVLVILESNWNKYDFKTLFGKGSENENVIKRTRKLFYVCMTRTK
KNIVIYMPTEDLEIINSAKEYFGEENVLSIDSI
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggatacaagaattttagaggatgaggtaaacactgctttacaatgtatagaaaaagga
gaaaattttatattagaaggtggagcaggaagtgggaaaacatattctctgattttatta
atagaaactttaattataaaattacctgaaattaagattgtatgtatcacatatacaaat
aatgcagttgcagaaattaaatcaagaattgataatgaaaatctttgggtttcaacaatt
catgagttcatttggtatataattaaaaaatatcaaaaagagataaaaaatgagttagta
cttcttattaataatgaaacaattaaaagttttaaaaagccaaaagacttagaaaataat
ttgattacaatagattattttaataatatagatgttgaatatgatgaatattattctatg
aatcctaatgaaaataaagttaaaattagtcatgatcatattttaattctggctgaaaaa
atgtttgataggtataaaaaactatcagatattttaaaagatgtagctaattgtattttt
gttgatgagtatcaagataccagcccatatataactaaaattttattagaacatcttaaa
aaaagtaaaaagaaaaatgttataggattttttggggattcaatgcaatcaatatatgat
gaaggagtaggagatttaaataaatataagttaaaaaaaatagtaaagaaacaaaatcgg
agaaatccaaggatagttatagagattgctaataaatttagagatgataaaataacacaa
gttccttctaaggataagaatgctcctaatatggacgaaaatggagttattattgagggt
aatattaaatttatatatggaaaagagcaagaggatataaattttcttaaaaataaagct
ctttttaagtcatggaattttttaaatggtgaacaaactagggaattaaggctaacacat
aaatataatgctgaaatggctggatttaaaaaattatatgatttatacaatgatgattta
ataattaaattaattgataatattcaaaaaaatattgataataatgaaaataaagaaagt
atattagatgaattagtactaaaattaagaccaacttataatagaaaagatttatttgaa
gaaattattggtaatgaaatatataaatcaatttaccaaaatataaaaaatttagtatgg
aaagatgcattagaaaaatgtaaaattagtaaggaatcattgatgtcttataaatttaat
ggaataaatggaagatatgagactaattcacacagagataaaattttaaaaaaattagat
gttttaaatgaattaatagaattgtatgaatctaagaaatttaatgaatttttaaagaaa
acaaatttttctattcaaaataaaaatgataaaagtaaacttaaagaattaatgaatttt
ttaatatttgaagatgaaaagacaatagaagaagttttagacttttcaaaaaaacaaggt
ttgataaaagaagatatgaactttgataactatattagtgttaaaggtttttatttatgg
gaaagaattaaaaaaatatcttttaaggaatatagaaatagtatcctttatttgaaagag
ttttcaccaatttcaactcagcatagtattaaaggaagtgaatttgataatgtacttgtc
atattagaatcaaattggaataaatatgattttaaaacactattcggaaaaggttcagaa
aatgaaaatgttataaaaagaacaagaaaattattttatgtttgtatgacaagaacaaaa
aagaatatagtgatatatatgcctactgaagatttagaaataataaattcagctaaagaa
tattttggagaagaaaatgttctttcaatagattcaatttaa
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