Fusobacterium animalis 4_8: HMPREF0409_02289
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Entry
HMPREF0409_02289 CDS
T02680
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fus
Fusobacterium animalis 4_8
Pathway
fus03420
Nucleotide excision repair
fus03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HMPREF0409_02289
03430 Mismatch repair
HMPREF0409_02289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fus03400
]
HMPREF0409_02289
Enzymes [BR:
fus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF0409_02289
DNA repair and recombination proteins [BR:
fus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF0409_02289
MMR (mismatch excision repair)
Other MMR factors
HMPREF0409_02289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
DEAD
PcrA_UvrD_tudor
CarD_TRCF_RID
ResIII
DUF6169
COG4_N
Motif
Other DBs
NCBI-ProteinID:
AGM23877
UniProt:
R9RDB5
LinkDB
All DBs
Position
complement(1490409..1492622)
Genome browser
AA seq
737 aa
AA seq
DB search
MNLNLLEKLNDKQREAASQIDGSILILAGAGSGKTRTITYRIAHMIENVGISPYSILAVT
FTNKAAKEMRERVEELVGDIAKACTISTFHSFGMRLLRMYGKEVGYNSNFTIYDTDDQKR
IVKAILKGKNLSINGIKLTERDLVSMISKIKEQIKTLDEYSVMNKQIVEVYDKYNRALLE
SNAMDFSDILLNTYKLLQKPEILEKVQNKYKYIMIDEYQDTNNLQYKIIDLIARKSSNLC
VVGDENQSIYGFRGANILNILNFENNYNNAKIIKLEENYRSTTTILDAANELIKNNKSSK
DKKLWTQNGKGDLIKVLACDNARDEVSRIIEIIKENHQNGIAYRDMTILYRTNAQSRLFE
EGFLRYNIPHKVFGGVSFYSRAEIKDIIAYLSIIVNPQDELNLQRIINVPKRKVGEKGIE
KIITYARENNLNLLEALSHIKEISGLTVVGKEKILEMYDIIKELKDLSYTETASYIVQTL
IDKIKYIDYIKENYSDAEARIENIDEFKNSILELENVVGELRLNEYLENVSLISATDDLE
EKSDYVKLMTIHNSKGLEFPIVFLVGFENEIFPGSRAMFEEKEMEEERRLCYVALTRAEK
KLYLSHATIRFVYGQDRLSTPSVFLKEIPEKLLDIDVKKERLYFADDYSDEIKAYENNRK
FEKKKTEINTKNTIKIPDNTKEVLDTLGFKVGDKVKHKKFGLGVIKNIDAKKIYVQYVDG
IKEMAIILADKLLTKFE
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgaacttattagaaaagttaaatgataagcaaagagaagcagcctcacaaatt
gatggttcaattttgattttagcaggggctggttctggaaaaacaaggacaattacatac
agaattgcacatatgatagaaaatgttggaattagcccttatagtattttagctgttaca
tttacaaataaagcagcaaaagaaatgagagaaagagttgaagagcttgtgggagatata
gctaaggcttgtacaatttccactttccattcatttggtatgagacttttaagaatgtat
ggaaaagaagtaggatataattcaaattttactatctatgatacagatgaccaaaaaaga
atagtgaaagctattttaaaagggaaaaatctaagtataaatgggattaaattgactgag
agagatcttgtttctatgatttcaaaaataaaagaacaaataaaaactcttgatgagtac
tctgttatgaataaacaaatagttgaagtatacgataaatacaatagagctttattagaa
agtaatgctatggatttttcagatatacttttgaatacatataaattattacaaaagcca
gaaatacttgaaaaagttcaaaataagtataaatacataatgatagatgaatatcaagat
acaaataatttacaatataaaataatagatttgatagcaagaaaatcatctaatctatgt
gtagttggggacgaaaatcaaagtatctatggatttagaggggctaatattttaaatata
cttaactttgaaaataattataataatgctaaaataataaaactagaagaaaattataga
tcaactactacaatattagatgcagcaaatgagttgataaaaaataacaaatcatcaaaa
gataaaaaattatggacacaaaatggaaaaggtgatttaataaaggttttagcctgtgat
aatgcaagagatgaagttagcaggataattgaaattatcaaagaaaatcatcaaaatggt
atagcttatagagatatgacaattctatataggactaatgcacaatcaagactttttgaa
gaaggatttttaagatacaatatccctcataaagtttttggaggagttagtttttattca
agagctgaaattaaagatataattgcatatttatctattattgttaacccacaagatgaa
ttaaatttacaaagaataatcaatgttccaaaaagaaaagttggggaaaaagggatagaa
aaaataatcacttatgccagagagaataatttgaatttacttgaagcactttctcacata
aaggagatttctggattaactgttgttggaaaagaaaaaattttagaaatgtatgatata
ataaaagaattaaaagatttatcttatacagaaacagcttcatatatagtacagacttta
atagataaaataaaatatatagattatattaaagaaaattatagtgatgcagaagcaaga
atagaaaatatagatgaatttaaaaactctattttagagcttgaaaatgttgtaggtgaa
ttgagattaaatgaatacttagaaaatgtatctttaataagtgcaacagatgatttagaa
gaaaaaagtgattatgtaaaattaatgactattcataattcaaaaggtttggagtttcca
atagttttcttagttggttttgaaaatgaaatctttccagggtcaagggcaatgtttgaa
gaaaaagaaatggaagaagaaagaagactttgttatgttgccttaacaagagcagaaaag
aagttatacttatctcatgcaactataagatttgtatatggacaagatagattgtcaact
ccatcagtatttttaaaggaaataccggaaaaactattagatattgatgttaaaaaggaa
agactatattttgctgatgattattcagatgaaataaaagcctatgaaaataacagaaag
tttgaaaagaaaaaaactgagataaataccaaaaatactattaaaattcctgataatacg
aaggaagttcttgatacattgggttttaaagtgggagataaagtaaaacataaaaaattt
ggtttaggtgtaattaaaaatatagatgctaaaaaaatatatgtacaatatgttgacgga
ataaaagaaatggctattatattagcagataaacttttaactaagtttgaatag
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