Fulvivirga lutea: JR347_00200
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Entry
JR347_00200 CDS
T07076
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
fuv
Fulvivirga lutea
Pathway
fuv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fuv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JR347_00200 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fuv03021
]
JR347_00200 (rho)
03019 Messenger RNA biogenesis [BR:
fuv03019
]
JR347_00200 (rho)
Transcription machinery [BR:
fuv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
JR347_00200 (rho)
Messenger RNA biogenesis [BR:
fuv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JR347_00200 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_22
OB_RNB
AAA_25
S1CSD-TOTE-2
Mor
AAA
Motif
Other DBs
NCBI-ProteinID:
QSE97545
UniProt:
A0A974WGC6
LinkDB
All DBs
Position
30892..32499
Genome browser
AA seq
535 aa
AA seq
DB search
MYTIEELNVRLLSELKEIAEELSLKNYKKLSKEELVYKILDQQAITPEEKLPKKKTSEEK
PAQEQKKRPRKRENVTEKKDAKDMNADELLESFDIELEKTAGSSDDKKDSKTDNSKSDNK
GKPDRKDNKSEKKVDRSSNKENKDDRGDRGGNRDHKKKESAIKDFDGVIENEGVLEIMQD
GYGFLRSSDYNYLASPDDIYVSPSQIKLFGLKTGDTVQGQIRPPKEGEKYFALLRVGTVN
GKTTEEIRDRVSFEYLTPLFPEEKIKLSTKPDNYSTRILDLFSPIGKGQRGMIVAQPKTG
KTVLLKNVANAIAENHPECYLIILLIDERPEEVTDMARSVKAEVISSTFDEQAERHVKVS
SMVLEKAKRMVECGHDVVILLDSITRLARAYNTVVPSSGKILSGGVDANALHKPKRFFGA
ARNVENGGSLTIIATALIETGSKMDEVIFEEFKGTGNMELQLDRKLSNKRVYPAIDVPAS
GTRREDLLMSEEELQRVWILRKFMSDMNSNEAMDFLLSKMRGTRNNEEFLISMNG
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtatacgattgaagaattaaacgtcaggcttctttctgaattgaaagaaatagctgaa
gaattaagcctgaaaaactacaagaaactctcaaaagaagagcttgtttacaaaatcctt
gatcaacaagccatcactccagaagaaaagcttcctaaaaagaaaacctcagaagaaaag
ccggctcaagaacaaaagaagcgtcctagaaaaagagaaaacgtaactgaaaagaaagat
gctaaagacatgaatgccgatgagctattagagtcttttgacattgaacttgaaaagact
gccggctctagcgatgataaaaaagattctaagacagataattctaagtcagacaacaaa
ggaaagcccgatagaaaggataacaaatctgaaaagaaggtcgatcgcagttctaacaaa
gaaaataaagatgatcgtggcgacagaggaggaaacagagatcacaagaaaaaagaaagc
gccattaaagactttgatggtgtaatagaaaatgaaggggtgctggaaatcatgcaagat
ggctatggtttcttaaggtcttcagattataactatttggccagtccagatgatatatat
gtctctccatcgcagattaaactatttggtttaaaaactggggatacagttcagggacaa
atcaggccaccaaaagaaggtgaaaagtattttgcccttcttagagttggtactgttaac
ggaaaaaccactgaggaaataagagatagagtttcttttgaatacttaacccctcttttc
ccagaagaaaaaataaaactgagcactaagcccgataactattctacaagaattttagac
ttattttctcctataggaaaaggtcagagaggtatgattgtagctcagccaaaaacaggt
aaaactgtattgttaaagaacgtggccaatgccattgccgagaaccatccggaatgttat
ttgatcattctacttattgacgaacgtcctgaagaagtaacagatatggccagaagtgta
aaagcagaggttatctcttctactttcgatgagcaggccgaaagacatgttaaagtatcg
agcatggtgcttgagaaagctaaaaggatggtagagtgtggccacgatgttgttatactt
cttgattcaatcacaagacttgcgagagcttacaacactgttgtaccatcatcaggtaaa
atactttctggtggtgtggatgcgaatgcactacataagcctaaaagattcttcggtgcg
gcaagaaatgtagagaatggtggttcacttactattattgctactgcattaattgaaaca
ggttctaagatggacgaggttatcttcgaagaatttaaaggtacaggaaacatggaattg
caattggatagaaaactatctaacaagagagtttatcctgctattgatgttcctgcttct
ggcacaagaagagaagacttactcatgtcagaggaagagctacagagagtttggatacta
cgcaaattcatgtctgatatgaattcgaatgaagctatggatttcctactttcaaaaatg
agaggcacgcgaaataacgaagagttcctgatttccatgaacggataa
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