Fulvivirga lutea: JR347_04635
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Entry
JR347_04635 CDS
T07076
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fuv
Fulvivirga lutea
Pathway
fuv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fuv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JR347_04635 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fuv03019
]
JR347_04635 (recQ)
03400 DNA repair and recombination proteins [BR:
fuv03400
]
JR347_04635 (recQ)
Enzymes [BR:
fuv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JR347_04635 (recQ)
Messenger RNA biogenesis [BR:
fuv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JR347_04635 (recQ)
DNA repair and recombination proteins [BR:
fuv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JR347_04635 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_45
Motif
Other DBs
NCBI-ProteinID:
QSE98368
UniProt:
A0A974WH09
LinkDB
All DBs
Position
994360..996516
Genome browser
AA seq
718 aa
AA seq
DB search
MKKPLEILSKTFGYNTFRPHQEEIINSVLDNNDTVVLMPTGGGKSLCYQVPALAKEGTAI
VISPLIALMKDQVDALRLHGVAAAYLNSTQTQEEQNQILSLMRTGELKLLYLAPERLLGR
EEQFITFIQNLTISLIAVDEAHCISSWGHDFRPEYLLLAKIKKSMARVPIIALTATADDL
TRKDIIAKLELPNPNVFVTGFNRPNIQYLVRPKSNSYAQLIEFLEKNKDECGIIYTLRRK
DTEELAERLMGDGLIAKPYHAGLDRSIRNQHQEEFLKDEVKIIVATIAFGMGIDKSNVRY
VVHMDLPKNIEGYYQETGRAGRDGLPSTALMFYSYSDFFSMQKLVEVDDNPEQSAVMVDK
LRQMANFGSLKSCRRRFLLEYFGEKAEAHCGNCDNCLSSFEEIDATELSQKVLSAVSRLD
QRFGVNYVIDFLKGSKSVKMREEHKQLKTFGVGADLSKDEWRHYINELVHLDYLGRSKGQ
YPVLQLTDKSVEVLQGLTRVNLPKAVDENMTFIDQQPAEIHQELIKNLKDVRRQMADSEA
VPAFVVFSDVSLRELATFLPQSSEELSRISGFGEIKVQRYGEPILQEIKSYCSKHQLSSN
VPAAKPKPRKTSATTLGDTYLKTFEFFQEGKDINAIAKVRSLAPGTIESHFDMLIRHGKL
KAQDILDHETITIIQQAIEKNAGVGLKPIKEELGDAFSYGEIRMVLAEMSYTKPQSII
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcctttagaaattctatccaagacatttggctacaataccttcagacctcat
caggaggaaatcatcaatagcgttttagataataatgatacagttgtattaatgcctact
ggcggaggcaagtcactatgctatcaagtgccggctttggcaaaagaaggtactgccata
gtcatttcacccctaattgctttgatgaaagatcaggtagatgcactgcgattgcacggg
gttgctgcagcgtacctcaattctacccaaacccaggaagagcaaaatcaaatactatca
ttgatgcgaacgggtgaattaaagttactttacctggcacctgaaaggttgttgggcaga
gaagaacagttcatcacttttatacaaaatttgactatttcgctcattgctgtcgatgaa
gcgcattgcatatcttcctggggccatgacttccgaccggaatatttgcttttggcgaaa
attaaaaaatcaatggcacgagtacccattattgcactcactgccacggctgatgatctt
accagaaaagatatcattgctaaactggaattgcctaatccaaacgtttttgtcactggt
tttaatcgtccgaatattcaatacctagtgaggcccaaaagcaatagctatgctcagctg
atagaatttttggagaagaataaagatgaatgcggcatcatatataccctacgaagaaaa
gatacagaggagttagcggagcgccttatgggagatggattgatagccaagccctatcat
gcaggtctggatcgtagtattagaaatcagcaccaggaggaatttctcaaagatgaagta
aaaataatcgtagccaccatcgcctttggaatgggtatcgacaaatccaatgttaggtat
gtcgtacacatggatttgcccaaaaatattgaaggatactatcaggaaacaggccgggca
ggtagggatggtttaccaagtaccgcactcatgttttattcctatagcgactttttttca
atgcagaaattagtagaggtggatgataaccccgagcaatcagcggtgatggtggataaa
ctaaggcaaatggccaatttcggaagtttgaaatcgtgtagaagaaggtttttattggag
tattttggtgaaaaggcagaggctcattgtggtaattgcgataactgcctaagtagtttt
gaagaaattgatgctactgagctttctcaaaaagtgctatcagctgtaagtagattggat
cagcgttttggggtaaattatgtgatcgactttttgaaaggatcaaaatctgtaaaaatg
cgggaagagcataagcaattgaagacatttggtgttggtgcagatttatccaaagacgaa
tggcgacactatatcaatgaattggttcatttggattatttaggtaggtctaaaggtcag
tatccggtgttgcaacttaccgataaaagcgttgaagttcttcaaggattaaccagagtg
aatctacctaaggctgtggatgaaaacatgacatttatagatcaacagccggccgaaata
catcaagagttgattaaaaacttaaaagatgtaagaaggcaaatggctgatagtgaggct
gttccggcttttgttgtattttcagatgtatctttaagagaattagccacgtttttgcca
cagtcttcagaggaattgtctcgcataagtggttttggtgagataaaagtacaacggtat
ggcgaaccaattttacaagaaataaagtcctactgcagtaaacatcaattatcctctaat
gtgccagcggccaaacctaaaccaagaaaaacgtctgctaccacactcggtgatacttat
ttaaaaacattcgaattttttcaagaaggtaaggatatcaatgcaatagcaaaagtaaga
agtcttgctccaggcaccatagaatctcatttcgatatgcttattcgtcatggcaaattg
aaagcacaggatattctcgaccatgaaactataaccattattcaacaagccattgagaag
aatgctggcgttggattaaagccgataaaggaggaattgggagatgcctttagctacggg
gaaataagaatggtgctggctgaaatgtcatacaccaaaccacagagcattatataa
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