Fulvivirga lutea: JR347_11725
Help
Entry
JR347_11725 CDS
T07076
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fuv
Fulvivirga lutea
Brite
KEGG Orthology (KO) [BR:
fuv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fuv03032
]
JR347_11725 (topA)
03400 DNA repair and recombination proteins [BR:
fuv03400
]
JR347_11725 (topA)
Enzymes [BR:
fuv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JR347_11725 (topA)
DNA replication proteins [BR:
fuv03032
]
Prokaryotic type
DNA Topoisomerases
JR347_11725 (topA)
DNA repair and recombination proteins [BR:
fuv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JR347_11725 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HTH_Tnp_Tc3_2
Motif
Other DBs
NCBI-ProteinID:
QSE96278
UniProt:
A0A974WF27
LinkDB
All DBs
Position
2616898..2619216
Genome browser
AA seq
772 aa
AA seq
DB search
MPKNLVIVESPAKAKTIEGYLGKDYKVTSSYGHVRDLPKGDKAIDKENGFLPTYEISPDK
KAVIKELKKLAKDSDIIYLASDDDREGEAISWHLKEALGLDDAKTRRIVFREITKNAIQN
AIQSPRGIDLDLVNAQQARRVLDRLVGFELSPILWKKIKTGLSAGRVQSVAVRLVVERER
EIEKFKPEIFYKITASFDVGNKKILQAELSKRFKTEDEAQKFLEACAEATFTIKDLQKKP
TKKTPAPPFTTSTLQQEASRKLGFSVSQTMTVAQRLYEAGIISYMRTDSVNLSQEAVDSA
VNEIKKEYGDDFVKVRQYKTKSSSAQEAHEAIRPTNFAVTNPSADRNGTRLYELIWKRAI
ASQMADAQIEKTTATIDISTLEDTLTASGEVVKFEGFLKVYLESTDDEDENEEQKGMLPP
LSAGQELDLTEMNARQGFTRPPARYTEASLVKKLEEMGIGRPSTYAPTISTIQKRNYVEK
EYREGKEREYQILTLKGGKINSKTQTEITGTEKNKMFPTNIAMVVTDFLVDHFPNVTNYS
FTAEVEQKFDEIASGMKEWDKMIGEFYSEFHAKVETTENIERADVPSSRELGMDPKSGRK
VIARLGKFGPLVQIGDEEEDGKKPQFASLRQGQFIESITLEDALELFKLPRELGEYEGKP
MLVGLGRFGPYVKYDGKFVSIPKTDDPYTIEDERAIELIKAKEEADKNKFIKTFDENPDV
QVLNGRYGPYIKVGRKNVKIPKDKEPKDLTLEECLELAEKTPEKKGRYAKKK
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagaatttagtgatagtggagtcaccagcgaaagccaagacgattgaaggatac
ttagggaaagattataaagtgacttccagttatgggcatgtcagagacttacccaagggc
gataaagccattgataaagagaatgggtttttacccacctatgaaataagccccgataag
aaagcagttattaaagaattgaaaaagcttgccaaggattctgacatcatctatctggcg
agtgatgatgaccgcgaaggagaagctatctcatggcatttaaaggaggctttgggttta
gatgatgctaaaacaaggcgaatcgtatttagagagattactaagaatgccattcaaaac
gctattcaatcaccgcgaggaatagatttggacttggtaaatgcgcagcaggctcgtagg
gtgttggatagattggtaggttttgagctgtctcctatactatggaagaagattaaaaca
ggtctttcggcaggtagggtgcaatcagtggccgtgaggttagttgttgaaagagagcgt
gaaatcgagaaattcaagccagaaattttctataaaatcactgcttcattcgatgtaggg
aacaaaaaaatacttcaagcagaactttctaaacgctttaaaacagaggatgaggctcag
aaattccttgaagcatgtgcggaggcaacgtttacaataaaggatcttcaaaagaagcca
actaaaaaaactcctgcaccaccatttacaacatctacattgcaacaggaggccagtaga
aaattaggcttttccgtatcgcaaacaatgactgttgctcagcgattatatgaagcgggt
ataatatcctatatgcgaacggactctgtgaatctatctcaggaagctgttgatagtgct
gttaatgaaattaaaaaagaatatggcgatgacttcgtaaaagtaaggcaatataaaacc
aaatcgagctctgcacaggaggcacacgaagccatcagacctacaaactttgctgtgacc
aatccttctgcagataggaacggcactcgtttatatgaattaatttggaaacgtgccatc
gcttctcaaatggcggatgctcaaatagaaaaaacaacagccacaatagatatttctacg
ttggaagacacacttactgcaagtggtgaagtggtaaaatttgaaggattcttaaaggtc
tatttggaatctacggatgatgaagatgaaaatgaagagcaaaaaggaatgttgccacca
ttgtctgctgggcaggaattagatttaaccgaaatgaatgctcgacagggctttacaagg
cctccggcaagatacacagaagccagtttggttaagaagttagaagaaatgggcatcggt
cgaccatctacttatgcgccaaccatttctacgattcaaaagcgaaattatgtagagaag
gaataccgtgagggaaaagaacgtgaatatcagatactaacactcaaaggcggtaaaata
aattctaaaacacaaacagaaattacaggcacagaaaagaacaaaatgtttcctaccaat
attgcaatggtggtgactgactttctggtagatcatttcccgaatgtgaccaactatagc
tttacagccgaagtcgaacaaaaatttgacgaaatagcctccgggatgaaagagtgggat
aaaatgataggcgagttttattctgaatttcatgcaaaagtagaaaccacagagaacatt
gagcgggctgacgttccgagttcaagagagttgggtatggatccaaaatcaggtagaaag
gtaattgcaagactgggcaagtttggaccattagtacagattggagatgaggaggaagat
ggtaaaaagccgcagtttgccagcttaaggcaaggccagtttattgagagcatcacgtta
gaagatgcattggagctatttaaacttcctagagaactaggcgagtacgaaggtaaacca
atgttggttggcttaggcaggttcggcccatatgtgaaatacgatggcaaatttgtgtct
attcctaaaactgatgacccttacactatagaagatgaacgcgccattgagttgatcaag
gcgaaagaagaagctgataaaaataagttcatcaaaacctttgatgagaatccggacgtt
caggtattaaacggacgctacgggccttacatcaaagtgggaaggaaaaacgtaaaaatt
cctaaagacaaagaacctaaagaccttacattggaggaatgcctggagttagcagaaaag
acgcctgagaaaaaggggaggtatgcgaagaagaaatga
DBGET
integrated database retrieval system
