KEGG   Fusobacterium varium: FV113G1_01160
Entry
FV113G1_01160     CDS       T05280                                 
Name
(GenBank) putative DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
fva  Fusobacterium varium
Brite
KEGG Orthology (KO) [BR:fva00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fva03032]
    FV113G1_01160
   03036 Chromosome and associated proteins [BR:fva03036]
    FV113G1_01160
   03400 DNA repair and recombination proteins [BR:fva03400]
    FV113G1_01160
DNA replication proteins [BR:fva03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    FV113G1_01160
Chromosome and associated proteins [BR:fva03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    FV113G1_01160
DNA repair and recombination proteins [BR:fva03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      FV113G1_01160
SSDB
Motif
Pfam: Bac_DNA_binding HU-CCDC81_bac_2 Spectrin_5 HU-CCDC81_euk_2 HROB DASH_Duo1
Other DBs
NCBI-ProteinID: BBA49770
LinkDB
Position
138686..138955
AA seq 89 aa
MNKRELAKVYSEMSKGEISARKALKEIEVFLETMQEALEKSHSLMFRNIGIFEVKERKSR
IIANPVTRELMKIYPKKIVKFRVFKSIVK
NT seq 270 nt   +upstreamnt  +downstreamnt
atgaataagagagaattagcaaaagtatacagtgaaatgagtaaaggggaaatatcagca
agaaaagcactgaaagaaatagaagtatttcttgaaacaatgcaggaggctttggagaaa
agtcattcattgatgtttagaaatataggaatatttgaagtgaaggaaagaaaatccaga
ataatagccaatccagtaactagagaattaatgaaaatatatccaaagaaaatagtaaag
tttagagtatttaaaagtatagtcaaataa

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