Fusobacterium varium: FV113G1_08120
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Entry
FV113G1_08120 CDS
T05280
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fva
Fusobacterium varium
Pathway
fva03420
Nucleotide excision repair
fva03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FV113G1_08120 (pcrA)
03430 Mismatch repair
FV113G1_08120 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fva03400
]
FV113G1_08120 (pcrA)
Enzymes [BR:
fva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FV113G1_08120 (pcrA)
DNA repair and recombination proteins [BR:
fva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FV113G1_08120 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
FV113G1_08120 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
DEAD
BORCS6
CarD_TRCF_RID
FWWh
RH1
DUF7795
PcrA_UvrD_tudor
BLOC1_2
Motif
Other DBs
NCBI-ProteinID:
BBA50465
LinkDB
All DBs
Position
922235..924412
Genome browser
AA seq
725 aa
AA seq
DB search
MSILEKLNDRQKKAAEKIEGALLILAGAGSGKTRTITYRIAHMIQELGISPYKILAVTFT
NKAAKEMKERVEDLIGEDGRRTMVSTFHSFGVRLLRTYGNRLGYGANFTIYDADDQKRVV
KGIMKELVVKDKNLTEGMAVSLISKLKEEEISADEYEKSENKYNMNAVVVAEIYRRYNIT
LKNNNGMDFSDILINTAKLLEIPDILNKVQDKFRYIMVDEYQDTNNIQYKIINKIASKYG
NLCVVGDENQSIYGFRGANIQNILDFEKDYPNAEVVKLEENYRSTSVILDAANAVISNNS
SARDKKLWTKKTTGEKITLLQCNDGRQEVNVIIEEIIKGKNQGKKYRDFTILYRMNAQSR
LFEEGFLRFNIPYKIFGGMQFYQRAEIKDIVAYLAVINNTKDSLNLSRILNVPKRKIGDK
SLEKINEFASVNGLTLFEALGRAKEIDTLTANMKLVLEEFYKMMTELIEISESEPVSELF
DKVVKSIKYFDYLEANYEDSENRINNIEELRNSITEMEKIIETLTLREYLENISLVSATD
NLEEEKDYVKLMTIHNSKGLEFPTVFLVGTEDEVFPGKKADFEPRELEEERRLCYVAITR
AEDKLYISYAASRFMYGEESFRTKSRFINELPENLLESNVESYFKREAINPVKTPVKQQF
KKMITIEDLNKTYKEYPYSIGEKVMHKKFGLGVVRGITDKKVEVDFVDGKREIAMAVADK
FLTKN
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgagtatattagaaaaattaaatgacagacagaaaaaagctgctgaaaaaatagaaggg
gcattgcttatacttgcaggggcaggttctggaaagacaagaacaataacttacagaata
gcacatatgattcaagagttaggaatatctccatataaaatattagctgtgacatttaca
aataaagcagctaaagagatgaaagaaagagttgaggatctcataggagaagatggaaga
agaacaatggtttctacattccactcatttggagtaagacttttaagaacatatgggaac
agactaggttatggagctaattttactatatatgatgctgatgatcagaaaagagtagta
aaaggcataatgaaagaacttgtagtaaaggataaaaatcttacagaaggaatggcagta
tcccttatttcaaaattaaaagaggaagaaatatctgctgatgaatatgaaaaatcagaa
aataaatataatatgaatgctgtagtagtagcagaaatatatagaagatataatataact
cttaaaaataataatggaatggacttttcagatatactaatcaatacagcgaaacttctg
gagatacctgacattttaaataaagttcaggataaattcagatatataatggttgatgaa
tatcaggatacaaataatattcaatataagataattaataaaatagccagcaaatatgga
aatttatgtgtagttggagatgaaaatcagagtatatatggttttagaggagctaatatt
cagaatattctagattttgaaaaagattatccaaatgcagaagtggtaaaacttgaagaa
aactatcgttcaacttcagtgatacttgatgctgccaatgctgtgataagcaataactca
agtgcaagagataaaaaactctggactaaaaaaactactggtgaaaaaataactctgctt
caatgcaacgatggaagacaagaagtaaatgttataattgaagaaataatcaaagggaaa
aatcaaggtaaaaaatatagagattttactattctttacagaatgaatgctcaatcaaga
ttatttgaagaaggttttttgagatttaatattccttataaaatatttggaggaatgcag
ttctatcaaagagcagagattaaagatatagttgcttatcttgctgttattaataatacg
aaagacagtcttaatttaagcagaatacttaatgtacctaaaagaaaaataggagataag
agtttagaaaagataaatgaatttgcttctgtaaatggacttactctttttgaagcacta
ggaagagctaaagaaatagatactcttacagctaatatgaaattagttttagaagaattt
tataaaatgatgacagaacttattgaaataagcgaatctgaacctgtttcagaacttttt
gataaagtggtaaaaagtataaaatattttgattatttggaagcaaattatgaagatagc
gaaaatagaataaataatatagaagaattgagaaactctattacagaaatggaaaaaata
atagaaactcttactttaagagaatacttagaaaatatatctttagtaagtgccacagat
aatcttgaggaagaaaaagattatgtaaagcttatgactatacataactcaaaaggactt
gaatttccaacagtatttttagtaggaacagaagatgaagtttttcctgggaaaaaagca
gattttgaaccaagagaacttgaagaggaaagaagattgtgctatgtagcaataacaaga
gcagaggataaattatatatttcttatgctgcaagcagatttatgtatggagaggaaagt
tttagaacaaaatcaagatttataaatgaacttcctgaaaatcttcttgaaagtaatgta
gagtcttattttaaaagagaagcaataaatcctgtaaaaactcctgtaaaacagcaattc
aaaaaaatgataactatagaagatttgaataaaacatataaagaatacccttattctatt
ggggaaaaagtaatgcataaaaaatttggattgggagtagtaagaggaataacagataaa
aaagtcgaagtagattttgtagatggaaaaagagaaattgcaatggcagttgcagataag
tttttaacaaaaaactag
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