Fusobacterium varium: FV113G1_08290
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Entry
FV113G1_08290 CDS
T05280
Name
(GenBank) hypothetical protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
fva
Fusobacterium varium
Brite
KEGG Orthology (KO) [BR:
fva00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fva01011
]
FV113G1_08290
Enzymes [BR:
fva01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
FV113G1_08290
Peptidoglycan biosynthesis and degradation proteins [BR:
fva01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
FV113G1_08290
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
TPR_2
ANAPC3
TPR_16
ARM_TT21_N
TPR_12
YfiO
TPR_1
COP9_hel_rpt
TPR_8
Motif
Other DBs
NCBI-ProteinID:
BBA50482
LinkDB
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Position
complement(941945..943792)
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AA seq
615 aa
AA seq
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MKKIFMILFFIINSSIAFTYTYEDYDIFIQGKNAYHNGHYEEAQNKFETLLKSYSFSPIL
KNNYAFYFIGMTYYRMEDWKNAVFYLEKAVFSHKLSFFNRGSEIEKNIYFAERDYSLGDA
LIKMGNKETGLLYLKRLDYSTFSPITSHFEERALELLAKEDIQYQNYYNLKFKSDFSHVG
EIPTTELLKAAHFFLSKKEYGKAEKLYKIILKNSNITKSDREKAESELFRTLIRAGKNKE
IITLTDEYAKNGNKDLYFFYKGVAYYRLKDFSRCLYAFENVKGSRYSSLALFYRTGIYYS
FGDYEQVLKTAAKIPHKNIITEIMVANSYLKLGNDKLFEKKAENIIKTYPNSYEGMFYSF
LLRNKDIDINKHNSVFKIGLILDNLLANCKNIDDNFVNTVDKIEIEKLSAIAAMKDEELI
KIEIENSSFINKHSIQNGYAITTILEKGEFFDLAYKNSSTYRKNFFEYKDLIKYNYPLYY
KNIVDVNSKKYDVPQELIYSAILISSKFNNRLLSENSKIGLMQIPYETRKEIIPLFDPKT
NIAMGTEKLKSLLETYEGNKLKSLIAYIYGEELLNKIQFDYDGDLNLELVADPEERYDLQ
NLILTYMFYKKLYNF
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatatttatgattttattttttattataaatagttctatagcttttacttat
acttatgaagattatgatatttttattcaaggaaaaaatgcatatcacaatggtcattat
gaagaagctcaaaataaatttgaaactcttttaaaaagttattccttttctcctattcta
aaaaataattatgccttttattttataggaatgacttattatagaatggaagattggaaa
aatgctgttttctatcttgaaaaggctgttttctctcataaactttcttttttcaataga
ggctcagaaatagaaaaaaatatttattttgctgaaagggattattcacttggtgatgca
ctcataaaaatgggaaataaagaaactggtctgctgtatttaaaaagattagattattct
actttttctcctattacttcacattttgaagaaagagcccttgaattacttgcaaaagaa
gatattcagtatcaaaattattacaatctcaaatttaaaagtgatttttcacatgtggga
gaaattccaacaaccgaacttctaaaagctgctcatttttttctttcaaaaaaagaatat
ggaaaggctgaaaaactttataaaataattctaaaaaattctaacattacaaaatctgac
agagaaaaagctgaatctgaacttttcagaactttaatcagagctggaaaaaacaaagaa
attattactttaactgatgaatatgcaaaaaatggaaataaagatttatattttttctat
aaaggagttgcttactataggctgaaagatttctcaagatgcctttatgctttcgaaaat
gtaaaagggagcagatattcttctcttgcattattttatagaacaggtatatattattct
tttggcgattatgaacaagtattaaaaacagcagctaaaataccacataaaaatattata
actgaaataatggttgcaaattcctatttaaaacttggtaacgacaaactttttgaaaaa
aaagccgaaaatataataaaaacatatcctaattcatatgaaggaatgttttattcattt
cttttaagaaataaagatattgatataaataaacataattctgtctttaaaataggattg
atacttgacaatctgcttgcaaactgtaaaaatatagatgataattttgttaatacagta
gataaaatagaaatagaaaaactatcagctattgcagccatgaaagatgaagaacttata
aaaatagaaatagaaaacagtagttttattaataaacattctattcaaaatggttatgca
ataactacaattcttgaaaaaggtgaattttttgatctggcttataagaattcttctaca
tacagaaaaaatttttttgaatataaagatttaataaaatataattatcctttatattat
aaaaatatagtagatgtaaactcaaaaaaatatgatgttcctcaagagcttatttattct
gcaatacttatttccagcaaattcaataatagacttttatctgagaactctaaaataggt
cttatgcagattccttatgaaacacgcaaagaaataattcctttatttgaccctaagaca
aatatagcaatgggaacagaaaaattgaaatctcttcttgaaacttatgaagggaataaa
cttaaatctcttatagcatatatttatggagaagagctgctcaataagatacaatttgat
tatgatggagatttaaatttagaattggtagctgacccagaagaaagatatgacctgcaa
aacttaatacttacatatatgttttataaaaaattatacaacttttaa
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