Fusobacterium varium: FV113G1_08920
Help
Entry
FV113G1_08920 CDS
T05280
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fva
Fusobacterium varium
Brite
KEGG Orthology (KO) [BR:
fva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fva03009
]
FV113G1_08920 (rimO)
Enzymes [BR:
fva01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FV113G1_08920 (rimO)
Ribosome biogenesis [BR:
fva03009
]
Prokaryotic type
ribosomal protein modification factors
FV113G1_08920 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
MM_CoA_mutase
POT1PC
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
BBA50545
LinkDB
All DBs
Position
1010019..1011356
Genome browser
AA seq
445 aa
AA seq
DB search
MKFALISLGCSKNLVDSENFIGILVNKRGFEVTSELGEADIIIVNTCGFIGDAKKESIET
ILEVSDLKINGNLKKIIVTGCLAQRYAGEILKELPEVDAVIGTGEIDKIEKVVEEVLADK
RVVESTKMDFLADSETDRVLTTASHTAYLKIAEGCDRKCTYCIIPQLRGSLRSRTIEDIL
KEANKLVDSGVRELNLLAQETTEYGIDLYKEKSLARLMKELVKIDGLKWLRTYYMFPDSL
TDELIDVMKNEEKICKYFDIPVQHISDNILQQMGRAKSGDHIKGILNRIRREIPDAVIRT
AVIVGFPGETEENFEELKAFIEEYKFDYVGVFKYSREEDTKAYDMENQVPEEIKEKRWVE
ITNLQSKIAENKNRNMLGKVVEVMIDGVSTESEYLLEGRTKGQALEIDGKVLTNDGTAKP
GEIVKVKLEQNFDYDFIGPIVENEQ
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgctttaattagcttgggatgcagcaaaaatcttgtggacagcgagaatttt
attgggatattagtgaataaaagaggatttgaagtaactagtgaattaggggaagcagat
attataatagttaatacctgtggatttattggagatgccaaaaaagaatcaattgaaact
atcctagaagttagtgatttaaaaataaatggaaatttgaaaaaaataatagtaactgga
tgcttagcacaaagatatgcaggagagatattaaaagaattgcctgaagtcgatgctgta
attggaactggtgaaattgataaaatagaaaaagtagtagaggaagtgttggcagataaa
agagttgtagaaagtactaaaatggattttctagcagattctgaaactgacagagttctg
actacagcttctcatacagcttatttaaaaatagctgaaggttgtgacagaaaatgtact
tactgtataattccacaattaagaggaagcttgagaagcagaactatagaagatattctt
aaagaagcaaataaacttgtagattctggagtgagggaacttaaccttttagctcaagaa
actactgagtatggaatagatttgtacaaggagaaatctttggcaagattgatgaaagaa
ttagtgaaaatagatgggttaaagtggcttagaacttattatatgtttccagattctctt
actgatgaacttatagatgttatgaagaatgaagaaaaaatatgtaaatattttgatata
cctgttcagcatatatcagataatatacttcaacagatgggaagagctaaatctggagat
catattaaagggatacttaacagaataagaagagaaataccagatgcagtgataagaaca
gcagttatagttggttttccaggtgaaacagaggaaaattttgaagaacttaaagctttt
atagaggaatataagtttgattatgtaggagtttttaaatattcaagagaagaagataca
aaagcttatgacatggaaaatcaggttccagaggaaataaaagaaaaaagatgggtggaa
ataacaaaccttcaaagtaaaattgctgaaaataaaaacaggaatatgttagggaaggtt
gtagaagtaatgatagatggagtttctactgaaagtgaatatttactagaaggaagaaca
aagggtcaagctcttgagatagatggtaaagtgcttacaaatgatggaacagcaaagcct
ggagaaatagttaaagttaaattagaacaaaactttgattatgattttataggaccaata
gttgaaaatgagcagtaa
DBGET
integrated database retrieval system
