Fusobacterium varium: FV113G1_09120
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Entry
FV113G1_09120 CDS
T05280
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fva
Fusobacterium varium
Brite
KEGG Orthology (KO) [BR:
fva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fva03016
]
FV113G1_09120 (truB)
Enzymes [BR:
fva01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FV113G1_09120 (truB)
Transfer RNA biogenesis [BR:
fva03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FV113G1_09120 (truB)
Prokaryotic type
FV113G1_09120 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BBA50565
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All DBs
Position
1030179..1031039
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AA seq
286 aa
AA seq
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MEGIINVNKPSGITSFDVVRKLRRILHERKIGHTGTLDPLAQGVLVVCIGKATKLVQDIE
GYEKTYTAGFELGYRTDTYDTEGQIIEKREVNNISLGKLENALKNFIGEIEQIPPMYSAL
KVDGKKLYELARQGIEVERKARLIEIKFIDIIEFDGLKGKIRCGVSKGTYIRSLIDDMGK
ALGTLATMTSLVREKVGTSNIKDSYTLEEIETMYSEEKTDFLYSVEDFFKYPKITLEGEK
NMILFLNGNTVRFAAADGRYRIYNNTGKFLGLCNVSNNLLKGYKYF
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
ttggaaggcataataaatgtgaataaacctagcggaataacttcttttgatgttgtaaga
aaattgagaagaattctgcatgaaagaaaaataggacatacaggaactctagatcctctt
gcacaaggtgttttagttgtatgtataggtaaagcaacaaaattagttcaggatatagag
ggatatgaaaaaacttatactgctggatttgaacttggatatagaactgatacctatgat
acagaaggacaaataatagaaaagagagaagtaaataatattagtcttggcaaactagaa
aatgcattgaaaaacttcattggagagatagaacagataccacctatgtattcagcttta
aaggtagatggaaaaaagctttatgaacttgcaagacagggaattgaagttgaaagaaaa
gccagattaatagaaataaagtttatagatatcattgaatttgatggattaaaaggaaaa
ataaggtgtggtgtttcaaaaggaacatacattcgttcattgatagatgatatgggaaaa
gctttaggaactcttgctacaatgacatctttagtgagagaaaaagtaggaacttcaaat
attaaagattcttatacactagaagagatagaaactatgtatagtgaggaaaaaacagat
tttttatacagtgtagaggatttctttaagtatcctaaaataacattagaaggagaaaag
aatatgattcttttccttaatggaaatacagtgagatttgcagctgctgatggcagatat
aggatatataataatactggaaaatttttaggattatgtaatgtaagtaataatttatta
aagggatataaatatttttaa
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