Fusobacterium varium: FV113G1_09840
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Entry
FV113G1_09840 CDS
T05280
Name
(GenBank) putative arginine utilization regulatory protein RocR
KO
K06714
arginine utilization regulatory protein
Organism
fva
Fusobacterium varium
Brite
KEGG Orthology (KO) [BR:
fva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fva03000
]
FV113G1_09840
Transcription factors [BR:
fva03000
]
Prokaryotic type
Helix-turn-helix
Other families
FV113G1_09840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA
Mg_chelatase
MCM
AAA_7
AAA_2
Bac_DnaA
AAA_3
AAA_16
GAF
GAF_2
Motif
Other DBs
NCBI-ProteinID:
BBA50637
LinkDB
All DBs
Position
1108397..1109791
Genome browser
AA seq
464 aa
AA seq
DB search
MELIKNLFGEKGYIDGITIIDTKGEILFTVKFNSKLNSNSEGYEVIGKNFYEIYENLSGN
KSSMYKAMELEMPIYVKNQKLKPKNHKEILISSLSIPIKSGGRVVGAIDLSSEEISDSKK
FEKDTEISLDELKKINLKNLSLNKNGAKYTLNDIITNNFEMKQLKEFIKTISDSYLPVMI
YGETGTGKELFAQAIHNESKRKDKPFIAQNCAAIPENLLESIFFGTSKGAFTGAVDSPGL
LETADGGTIFLDEINSMPMNLQSKLLRALQENKIRRIGAKDVIDINVKIIAALNKDPMKA
IEDNELRMDLYYRLSVLNITIPPLRERKDDISVLVNYFVAKYNELLEKNVRYISSDICQT
FQTYDWPGNIREIEHIVAFGMSVIRADEEKLEFSDLERKWIEITGKKKQKAELPVKDLKT
MVEEYEKSVIEKVLEMSRHNITKASLILKIPRQTLQRKIKQYEL
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggaacttataaaaaatctttttggggaaaaaggttatatcgatggaattacaattata
gatacaaaaggggaaatactatttactgttaagttcaatagtaaacttaatagtaacagc
gaaggttatgaagtaataggaaagaatttttatgagatatatgaaaatctttctggaaat
aaaagcagcatgtataaagctatggaattagaaatgcctatatatgttaaaaatcaaaaa
ttaaaaccaaagaaccataaagagatattaatatcatcgctatcaataccaataaaatct
ggaggtagggtagtaggagctattgatttatcttcagaagagataagtgattctaaaaag
tttgaaaaagatactgagataagtttggatgaattaaaaaaaataaatttaaaaaatctt
tctttaaataaaaatggtgctaaatatactcttaatgatattattactaataattttgaa
atgaagcaattgaaagaattcataaaaacaatatctgattcataccttccagtaatgatt
tatggagaaacaggaactggaaaagaactttttgctcaggctatacataatgaaagtaaa
agaaaagataaaccttttatagcacaaaactgtgcagccatacctgaaaatcttcttgaa
agtatattctttggtacatctaaaggtgcttttacaggagctgtagatagtccagggttg
ttagaaacagcagatggaggaactatatttttagatgaaatcaattctatgccaatgaat
ctgcaatctaaattattgagagcactgcaggagaataaaatcagaagaataggagcaaag
gatgtaatagatataaatgtaaaaataattgctgcattgaataaagatcctatgaaagct
atagaagataatgagctaagaatggacctttattatagacttagtgttttaaacataact
attcctccactaagagaaagaaaagatgatatatctgttcttgtaaattattttgttgct
aaatacaatgaacttcttgaaaagaatgtaagatatatttcaagtgatatatgccagaca
tttcagacatatgattggccaggtaatataagagaaatagaacatatagtggctttcggt
atgagtgttataagagcagatgaagaaaagcttgaattttcagatttagaaagaaagtgg
atagagataactggaaagaaaaaacaaaaagcagaacttccagttaaggatttaaaaaca
atggtggaagaatatgagaaaagtgtaatagaaaaagttttagaaatgtctaggcataat
ataacaaaagcttcattgatactgaaaataccaagacaaactttacaaagaaaaattaaa
caatatgaattataa
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