Fusobacterium varium: FV113G1_10440
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Entry
FV113G1_10440 CDS
T05280
Name
(GenBank) penicillin-binding protein
Organism
fva
Fusobacterium varium
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Beta-lactamase2
DUF4119
Motif
Other DBs
NCBI-ProteinID:
BBA50697
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Position
1177752..1179863
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AA seq
703 aa
AA seq
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MLRRLKAFILFLNLIGIGVTIYYKMYMLTCFTVLLFFYFLYIFLKREEMETTNLFNRRAL
ISSNIILFCFMLILFRLIQVQIFDNAMYVEKVNNQTMTVNKNSGNRGSIYDSNGKSLAFN
KSIYDLIIDPSRIYEKPEILKAFDEISQKSYIRLNNKKFLNELDEGYKTKKKYKIIAKNL
DEVEKAEIDEILKKYKLNTNEMFYRKNIERTYYKKDIYNDLVGLIGYTATSKDVKTGVFG
IEKQYEKYLKEKTVERKNPYTRNRGIRIPTSKDEIRTSLNGRNVYMTIDNDLQFILNDEV
KKKFESSNSDEAYGIIMDPNTGKILATAAYTRKKRALRNPIFQDQFEPGSTFKPIIVASA
LNEGLIKRSTKFDVMDGTIRKYNHTIKESSRSTKGILTTEEVLKKSSNVGMVLIGDTFTE
KTYEEYLRSFGLYDRTGIDFPAEIKPYTTPYKRWDKLKKSTMSFGQGIVVSPIQLATAFS
AVINGGILYKPYLVEKITDDNNVVIRRNLPTPVRQVISPEVSREMRDILENVVRDGTARR
GDVEGYRVGGKTGTAQLSTKGGYLKSDYLASFIGFFPADKPKYVVLVMFMKPKGETVFEK
YGGATAAPVFGEIVRRVTKNKNILSQDIAKISEIKNFENMKRNNEEVKVEMPDLTGLSPK
DVIYIFKNADIDVRIVGKGLVESQKPKAGTSLEGVTSIEVQLK
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gtgcttagaagattaaaagcttttatcttatttctaaatcttattgggataggggttact
atttactataaaatgtatatgcttacttgcttcacagttcttttatttttttattttttg
tatatttttttaaagagagaagaaatggaaacaactaatctttttaacaggagagcttta
atttcatcaaatataatattattttgctttatgcttatactttttagattaatacaagta
cagatatttgataatgccatgtatgtggaaaaagtgaataatcaaacaatgactgtaaat
aaaaactcaggaaacagaggaagtatttatgacagtaatgggaaaagtttggcttttaac
aaaagtatttatgatttgataatagatccaagtagaatatatgaaaaaccagaaatatta
aaagcatttgatgaaatatctcaaaaatcatatataagattaaataataaaaaattttta
aatgaattagatgagggatataaaacaaaaaagaagtataaaattatagctaaaaatctc
gatgaagtggaaaaagctgaaattgatgaaatattaaaaaaatataaattgaatactaat
gaaatgttttatagaaaaaatatagaaagaacttattataaaaaagatatatataatgac
ttggtagggcttattgggtatactgcaacttcgaaagatgtaaaaactggagtatttgga
atagaaaaacaatatgaaaagtatcttaaggaaaaaactgttgaaagaaaaaatccatat
actagaaatagaggaataaggatacctacatcaaaagatgaaataagaacaagtttaaat
ggaagaaatgtttatatgactattgataatgatctccaatttattcttaatgatgaagta
aagaaaaaatttgaatcttcaaattcagatgaagcatatggaataattatggatcctaat
actggaaaaattttggcaacagcagcatatactagaaaaaaaagagcacttagaaatcca
atttttcaagatcaatttgaaccagggtcaacttttaaacctattatagtggcttctgct
cttaatgagggacttataaaaagaagtactaaatttgatgtaatggatggaacaataaga
aaatataatcatacaataaaagaaagcagtagaagtacaaaagggatattaacaactgaa
gaagtattaaaaaagtctagtaatgttggaatggtattaataggagatacatttactgaa
aaaacttatgaggaatatctaagaagttttggtttatatgacagaacaggtattgatttt
ccagctgaaataaaaccatatacaacaccatataaaagatgggataaacttaaaaagagt
acaatgtcttttggtcaaggaatagtagtgagtccaatacagttagcaacagctttctct
gctgttattaatggcggaattttgtataaaccatatttagtagagaaaataactgatgac
aacaatgttgtaataagaagaaatcttcctacaccagtaagacaggtaatatcaccagaa
gtttcgagagaaatgagagatatactggaaaatgtagtaagagatggaactgctagaaga
ggagatgtagaaggttatagggtaggaggaaaaactggaactgctcaattgagtacaaaa
ggtggatatctaaaaagtgattatcttgcttctttcataggtttttttccagcagataag
cctaagtatgtagtacttgtaatgtttatgaaacctaagggagaaactgtatttgaaaaa
tatggaggagctacagctgctccagtgtttggagaaatagttagaagagtaacaaaaaat
aaaaatattttgtcacaggatattgctaagatttctgaaattaagaattttgaaaatatg
aaacgtaataatgaagaagtaaaagtagaaatgcctgatcttacaggattaagccctaaa
gatgtaatttatatatttaaaaatgcagatatagatgtaagaattgtaggaaaaggtttg
gtggaaagtcagaaaccaaaggcaggaacttctttagaaggagtaactagtatagaggtg
cagttaaaatag
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