Fusobacterium varium: FV113G1_11530
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Entry
FV113G1_11530 CDS
T05280
Name
(GenBank) putative autotransporter
Organism
fva
Fusobacterium varium
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WZC_N
ATP-synt_ab_C
Motif
Other DBs
NCBI-ProteinID:
BBA50804
LinkDB
All DBs
Position
1304906..1315009
Genome browser
AA seq
3367 aa
AA seq
DB search
MRKGDIEKSLKRFLKRKVSYSFALLIAFIITGGISLGAEITAEEIQESKGDLLSRIQTER
EEIKRKIAENERLIKEYNSNFVELVRKGDFYSKPLFNSTQVFFSYQHLDSGKMKDVTDKE
FAETIDAINKHYGTRSGRSILKSTGNIGKDKLMTGNGVAVDTEVFRETIEVGANIKPVEP
VLPEINPNVSVNVSAPEVTLSGLPDSIEVVVTGIGGIASPSIGSLTAPGSLNVNVSTPTK
VDKIEITAPEIETPTAPDEKNITVSAPATPGGFTPTTVTPPTVPTAPIVAGISVPNIVVP
NLTSPSSGNSDGSWAWNTGGSNGLISQVITTKGNFIFTTGGSSSTDSFTAAVTGYTATAA
SGYSVSVDDVTYGTTNVGSGKAGMYRIVGSRYSSFGKETKITINATARPDTGNALRQFIH
FDPHGDRAAATINDITEASNAEKTQATNLVNKYKGAHSNFEDKGYQILALNGELTINGNT
MVGVGLQGHANAGRNPMILHTGTTVINGNKNAVFAYPNDGDQVNRLYIATNYGTGKIEIN
GNNNFVMLAEKNNKGTYNGQSYEHVHNFENSGIIDIKTGNNNIGFFGKQGVNNGYLDLQN
PIIISSNGTENIGVYQNSGANNNLNVNSVIKVDISSGSKNVGYVGNYSSQTINTNVYNIT
GGTNNIGVISNNALTLNGLILNISGGKTNFGLVNKIGTLTSNGAINISGGNDNIGIANQS
AGTATHTGNIVLSAGGRNNIGVYGDTTASTIITGKIQVDGIENKAVYGKNSHTITVNNIT
ANTTDSIVVYGESGAKITANELNVISKVDGKDTGAAFAKGSGTTITINRAAIPGTANIDI
TGKLTSTGGYVGFGLMAADGGVINAKNNYIKVTDGSTAVASIGANSNIDLSGGTVEFNGS
GYAVYSDGVGKIDLSGAKVILAGSSTAFDLNLTPGAISPIKLDGDSRIKVVSDEVVVFNL
QNATGLSTNGLQQSITDALGTAIGGGINLNKLLEESTATNYKTAAVDGGTIIIGSLDKTG
IGAVGETQEQKDGNFYYNRFLGQRLVATATNSTVSAVLNNTLASKFNNQVVGLEMNSSKL
AVSNTEAGIKLVNSTIIADRNEVGAGAIGAYINYGIVEVDGTSTIKVEKETANGNSANAG
AVGVYAVNGSEVSNAGAIEVGGGQSIGILGMAYRETLDGTVVGAEYGSSAIGQGKVTITN
TGNIVLDGIGTIGIYANNNNTGGAAADNVVKNEASGTITVGNSDNSAAAIGIYGKKATIT
NEGNITVGSGGVAIYATEGSNVTKLGTLNLGSDGIGVMIDGTSRITATGNVTLNSATGAI
DDKGKIGIFYKGSATGSDSKDINLNINASNFVKGTAMYVQDMTVESSGNLTVGTEGIGIF
VAKKDAAATGTNKGTINLGTSERAIGMYGKDTAIANETGNGIINIDHSSQIGMYATGGNG
KVTNTGVINLNVDKATGIYVEAGATAEISGDNIAFAGKSSVGVFAENAMVNFKEGLTFTS
NNADKNIYVYGKGATVGIDTGKTVIVDGTTGASGDKTVGIYLENAGTGSTFNGTGNLTVK
NGAVGIYSKGNNDLTVNVKAEGDKTTGVFIDGESKIKGTVTAITGAIGVYGSEGVVNIDT
GLTLNIGAGADKGTGMYLTDGAYAAGGTITVNNSSTENNIGVYYSKGNTTGTVTNGSEIK
LTGTKGVGIYAADGITLVNNANITSTAGQSDSIASYIGGGSQLTSTGIITMNDNDSIGIY
VEEGKGINSGTITMNGAASTSTKSVVGMVAQADSGETATIENATSKEIKVGANLGMYIAG
AGTNIGINAGTITATTGTGVYVNGSGNSFNGAGGTITSNGVGIYLKNTDTGTVTNTGTLD
IASGGVGVFGENAKIDFDVNVSGAGAVGVVAAGTTAISGKIITGQNSVGVYIQDNNVIFD
NATITTGTNIPGGTSVGILFDGTKQYNSTIDNVTIDAKNGVGIYLDGSSGTTLNFGGTVA
TAGTGAVGIYVKTGNTLNSNNSSFNISNGAVGVYVNGGTANLGTTGNLTFNFETGGGIGV
YNKGGTLVLGNNISTIGSGSLAATVNGDLTSSGNLNIGEGGQGLLGSYDNGTTTPKSIVN
QSTGNITATSGGIGLAAVKGATAPTGDITINNAGNITASGKSSAGKNSVGIYTDVAAINN
TGTVNVGTDGIGIYAAESGKAVTNDNMTMTGNNGIGVYIKGATGGLTANNITSTTTGNTG
LVLEGVTSNIDAGTITLGNESVGVMATGTTSAIAGTIKVGDSSTGKSAIGIAAKSSNLNL
AGITRITAGKGGIGIYAEGTSQVTNVDAAKITVGADGIYMYSTANTSISFTGNITADNQI
GIVVNQGTVTGTSSTITAKNGGIGAYVKGTGSQFTGTNIIVQSGIAETGTDPAKYSVGVY
YEEAGNIGALPVITQTGSYTIGTVLNKSTGSTAAGINIGTSGSNQVGVMAKGNSTFNVTA
GGITVADGDSNIGIYGENSAINVTGNILVGTASSLTNSSIGVSLNGGSYTGTTGDLLVGS
NSIGIYGKNMTGNISQSGTTMNVGNNGVGIYGSGTGNITLTMSTGITLGSGNSIGIYAKG
MDAAVTGNMTIGANTSIGIVSEGNGNVAHIGAMNIAGKGTGEGDTGSVGIYKLNGTGTIT
TAGNGWTIGNNGYGIFMKQEKGQIATINNGADMNLGTAAVGIYSSGVNTVNNSGTITVGE
TDTKGDPNKTQDHLNSVGIYVTNGTTVNNTGTIDVKHDFSVGIYGSGEGTHITNALGATI
NVDKGGVGILVQNKAIAVNKGTINLGSIESPYTTTVGMAAYSGASIINAFGAVIKVGEGS
GMVVGVGATLTNNGKIEVTNGVGIQGGGQILNQGDITIQPGGSGIQVGNTGVGSAEVGSI
KIDSEGNVTINDKYVGIGGSLSVEGNLIINGAYVDVTTNTPIFNANSVSGEVNILPNFAL
TGNGITYKIEDFVNVAMGTITGNKLTPVTSPLFIAKVTEDGDLVIAKRPYADLTIGEQFD
ALDKGLDNILANSNGIGKDADILKGLNAYLEGLPDNQFEGETSRKLAETRGDIYSTIQGR
MQDINRAFDNSFYELESSYNLTKDSSKYSVIYTDGDYKDPTLGIEDYDYKIMGVLYMKEK
EGTEYGSKYGYTLGFTGSKFDFENNSKEDVYSLRAGVHRVKNLSEEHKVSWLSRIELGYN
RHIAKRKLNLHEVFENKGEYNTYSVALDNRLTKVIYTDLSRQLDIYADLDLEYGKVDGFT
ESAGSNGGLEVQIKDNDYLSAQLGAGVKASQRIYAGNDISVKVTADVKYAYELGDNYDGN
KARLKNGGEGYYSLITPDEREGKLTGKVGLTVEKANHMGVTFEVEAADEESRKDSSVKYG
VRFNYKF
NT seq
10104 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaggcgacattgaaaaatctctaaaaagatttctaaaaagaaaagtgagttat
tcttttgctcttttgatagctttcataataacaggaggaatatcattaggagcagaaata
acagcagaggagatacaggaaagtaagggagatcttttaagcagaatacaaacagagcgg
gaagaaataaagagaaaaatagcagaaaatgagagattaataaaagaatataattcaaac
tttgtggaattagtgagaaagggagatttttactctaagcctttattcaacagcacacaa
gtttttttcagctatcagcatttagatagtggaaaaatgaaagatgtaacagataaagaa
tttgcagaaacaatagatgcaataaacaagcattatggaacaagaagtgggagaagtata
ttaaaatctacaggaaatataggaaaagataaattgatgacaggaaatggagtggctgta
gatactgaggtatttagagaaacaatagaagtaggagcaaatattaaaccagtggaacca
gtacttccagaaattaatccaaatgtttcagtaaatgtgtcagcaccagaagtaacttta
agtggattacctgattcaatagaagtagtagtaactggaataggaggaatagcatcacct
tcaataggatcactaacagcgccaggaagtttgaatgtaaatgtgtcaactccaacaaaa
gttgataagatagaaataacagcaccagaaatagaaacaccaacagcaccagacgaaaaa
aatataacagtaagtgcaccagcaacacctgggggctttaccccaacaacagtaacacct
ccaacagttccaacagcaccaatagtagcagggattagcgttcctaatatagttgttcca
aatttaacttctccatctagtggaaatagtgatggttcatgggcttggaatactggtgga
agtaatggacttatatctcaagtgataactacaaagggaaattttatatttacaactgga
ggttcaagttcaacagactcttttacagcagcagttactggatatacagcaactgctgca
agtggttatagtgtaagtgtagatgatgtcacatatggaaccacaaatgttggaagtggt
aaagctggaatgtatagaattgtaggtagcagatattcaagttttggaaaggagaccaag
ataacaattaatgctacagctcgtccagatactggaaatgctttgagacaatttattcat
tttgatcctcatggagatagagcagctgcaactattaatgatataacagaggcttcaaat
gcagaaaaaactcaagcaacaaatttagtgaataaatataagggagcacattcaaatttt
gaagataaaggatatcagatattagctttgaatggagaattaactataaatggaaataca
atggttggagtagggctgcaaggccatgcaaatgctggaagaaatccaatgattttacat
actggaacaacagttataaatggaaataaaaatgctgtatttgcttatccaaatgatgga
gatcaagtgaatagattatatattgctacaaattatggaactgggaaaatagaaataaat
ggtaataataactttgtaatgttagccgaaaaaaataataaaggcacatataacggacaa
tcttatgagcatgtacacaattttgagaatagtggaattattgatataaaaacaggtaat
aataatataggtttctttggaaaacaaggggtaaataatgggtatctagatttacaaaat
cctataataatatcatctaatggaacagaaaatataggagtttatcaaaatagtggagct
aataataatttaaatgtaaattcagtaattaaagttgatatatcatctggaagtaaaaat
gtagggtatgtagggaattattcttctcaaaccataaatacaaatgtttataatataaca
ggtgggacaaataatattggagtaattagtaataatgctcttactttaaatggattgata
ctgaatatatcaggtggaaagacaaattttggtcttgtaaataaaataggaactttgact
tctaatggagcaattaatatatctggtggaaatgataacattggaatagcaaatcaatca
gcagggacagctactcatacaggaaatatagtgctatcagcaggaggaagaaataatatt
ggagtttatggagatacaactgcttctaccattataactggaaaaatacaagttgatgga
atagaaaataaggcagtttatggaaagaattctcatacaataactgtaaataacataaca
gcaaatacaacagattcaatagttgtctatggagaaagtggagcaaaaattacagctaat
gaattaaatgtaatttcaaaagtagatggaaaagatacaggagcagcctttgcaaaagga
agtggaactactattacaattaatagagcagcaattcctggaactgctaatatagatata
actggaaaattaactagtacaggaggatatgttggatttggattaatggcagcagatggc
ggagttattaatgccaaaaataactatataaaagtaactgatggttcaacagcagtagca
tctataggggcaaactctaatatagatttatcaggaggaacagtagaatttaatggttca
ggatatgctgtttattcagatggagtaggaaaaatagacttaagtggagcaaaagtaata
cttgctggaagttccacagcatttgaccttaatcttactccaggagcaatttctccaata
aaattagatggagattcaagaataaaggtagtttctgatgaagtcgttgtatttaattta
caaaatgcaactggactaagtacaaatgggctgcaacagagtataacagatgcattagga
acagctatagggggaggaataaatcttaacaaacttctagaagaaagtacagctactaat
tataaaacagcagctgttgatggtggaacaattattattggaagcttagataaaactggt
ataggggcagttggtgaaactcaagaacagaaagatggaaatttctactataatagattc
ttggggcaaaggcttgtagcaacagctacaaacagtacagtttcggcagttcttaataat
acattggcttcaaaatttaataatcaagtagttggattagaaatgaactcaagtaaactg
gctgtttctaatacagaagcaggaataaaattagttaattcaactattatagctgataga
aatgaagtaggtgcaggagcaataggagcctacataaactatggaattgtagaagtagat
ggaacaagtacaataaaagttgaaaaagaaactgctaatggtaatagtgcaaatgctgga
gcagtaggagtctatgcagtaaatggaagtgaagtatctaatgctggagctattgaagta
ggtggaggtcaatctataggtattttaggaatggcatatagagaaactcttgatggaaca
gtagtaggagcggagtatggtagtagtgcaatagggcaaggaaaagtaactattacaaat
acagggaatattgttcttgatggaataggaacaataggtatctatgctaataataacaac
actggtggagcagctgcagataatgtagtaaaaaatgaagcttcaggaacaataacagta
ggaaattcagataattctgctgcagctataggaatctatggaaagaaagccacaattaca
aatgaaggaaatataacagtaggaagtggcggagtagctatctatgcaacagaaggaagt
aatgttacaaaacttggaacattaaatcttggttcagacgggataggagtaatgattgat
ggaacatcaagaattacagccactggtaatgttacattaaatagtgctactggtgcaata
gatgataaaggtaaaataggtatcttctataaaggttcagcaaccggaagtgacagcaaa
gatataaatttaaatataaatgcctcaaattttgtaaaaggaacagctatgtatgtacaa
gatatgactgttgaatcatctggaaatttaactgttggaacagaaggaataggtattttt
gttgcaaagaaagatgcagcagcaacaggaacaaacaaaggaacaatcaatcttggaaca
agtgaaagagcaataggaatgtatggtaaagatacagctattgccaatgaaacaggtaat
ggaataattaatattgaccattcttctcaaataggaatgtatgcaactggtggcaatggt
aaggtaacaaatacaggggtaattaatctaaatgtagataaagctacaggtatctatgtt
gaagctggtgcaacagctgagattagtggagataacatagcatttgctggaaaatcaagt
gtaggagtttttgcagaaaatgcaatggtaaactttaaagagggtttgacttttacaagt
aataatgcagataaaaatatctatgtatatggtaaaggtgcaacagttgggatagataca
gggaaaactgtaattgtagatggaacaacaggagcttcaggagataagacagtaggaatc
tatctagaaaatgctggaactggaagtacatttaatggtacaggaaatcttactgttaaa
aatggagcagtaggcatctattcaaaagggaataatgatttaactgtaaatgtaaaagca
gagggagataagactacaggagtatttattgatggagaatcaaaaataaaaggaactgta
acagctataacaggagcaataggagtatatggaagtgaaggagttgtaaatatagataca
ggacttactttaaatataggagctggagctgacaaaggaacaggaatgtaccttacagat
ggtgcttatgcagctggagggacaataacagtaaataattcctcaacagagaataatata
ggagtgtattacagtaaagggaatacaacaggaactgtaacaaatggatctgagattaaa
cttacaggaactaaaggtgtaggaatatatgcagcagatggaataactttagtaaataat
gcaaatattacatcaacagctggacagagtgacagtatagcttcatatataggaggaggt
tctcaattgacttcaacaggaattatcacaatgaatgataatgacagtataggaatctat
gtagaagaaggtaaaggaatcaactcaggaactattacaatgaatggggcagcaagcaca
tcaactaaatcagttgtaggaatggtagctcaggctgattcaggagaaacagcaactata
gaaaatgcaacatcaaaagaaataaaagttggtgcaaatcttggaatgtacatagcaggg
gcaggaacaaatataggaataaatgcaggaacaattactgcaacaacaggaacaggagta
tatgtaaatggttcaggaaacagttttaatggagctggaggaactatcacatcaaatgga
gtaggaatttatttgaagaatacggatacaggaactgtaactaatacaggtactttagat
atagcttcaggaggagtaggagtatttggagaaaatgctaagatagattttgatgtaaat
gtttcaggcgctggagcagtaggagttgtagcagcaggtactactgcaatctcaggaaag
ataataacagggcagaattcggttggagtatatatacaagataataatgtgatttttgat
aatgcaactataacaacaggaacaaatataccaggaggaacatcagttggaatactattt
gatggtacaaaacaatataattctaccatagataatgtaacaatagatgcaaaaaatgga
gtagggatatatttagatgggtcatcaggaacaacccttaactttggtggaactgtagca
actgcaggaacaggagcagtaggaatatatgtaaaaactggaaatactttaaatagtaat
aattcatcatttaacataagtaatggagcagtaggagtatatgtaaatggaggaactgcc
aatctaggaacaacaggaaatcttacatttaattttgaaactggtggaggaataggagtt
tacaataaaggaggaactcttgttcttggaaataatatatctacaataggttcaggatca
ttagcagcaactgtgaatggagatttaacttcatctggaaatttaaatataggtgaagga
ggacaaggacttcttggttcatatgataatggaactacaacacctaaaagtatagttaat
caatctactggaaatataacagctacatcaggaggaataggacttgcagcagtaaaaggg
gcaactgctccaacaggagacataacaataaacaatgctggaaatataacagctagtgga
aaatcaagtgcagggaagaattctgtaggaatatatacagatgtagcagcgataaacaat
acaggaactgttaatgtaggaacagatggaataggaatatacgctgctgaaagtggaaaa
gcagtgacaaatgataatatgactatgacaggaaataatggaataggagtatatatcaaa
ggagcaacaggcgggcttactgcaaataatataacttcaactactacaggaaatacaggc
ttggttcttgaaggagtaacatccaatatagatgcaggaactatcactctaggaaatgaa
agtgtcggagtaatggcaacaggaacaacttctgcaatagctggaactattaaagtagga
gattcaagcacaggaaagagtgcaataggaatagcagccaagagttctaacttaaattta
gcaggaataacaagaattacagctggaaaaggtggaataggaatatacgctgaaggaaca
agtcaggtaacaaatgtagatgccgctaaaataacagttggtgcagatggaatatatatg
tattctactgcaaatacttcaataagtttcacaggaaatatcacagctgataaccaaata
ggaatagtagtaaaccaaggaactgtaactggtacaagctcaactataacagctaaaaat
ggtggaataggagcatatgtaaaaggaacaggttcacaatttacaggaacaaatattata
gttcaaagtggaattgctgaaacaggtactgacccagcaaaatattccgtgggagtctat
tatgaggaagcaggaaatataggagcactgccagtaattacacaaacaggaagctataca
ataggaacagtattaaataaatcaacaggaagtacagctgctggaattaatattggaact
tctggaagtaatcaggtaggagtaatggcaaaaggaaactctactttcaatgtaacagca
ggaggaattacagtagcagatggagatagtaatattggtatatatggagaaaatagtgca
attaatgtaactgggaatatattagttggtacagctagttcattaacaaattcatcaata
ggagtttctttaaatggaggttcatatacaggaactacaggagatcttttagtaggaagt
aacagtataggaatctatggaaaaaatatgactggaaatatcagtcaaagtggaacaact
atgaatgtaggaaataatggagtaggtatctatggttctggaactgggaatatcacttta
acaatgtcaacaggaataactcttggaagtggcaattctataggaatatatgctaaagga
atggatgcagcagtaacaggaaacatgacaattggcgcaaatacaagtataggtattgta
agtgaaggaaatggtaatgtagcgcatattggagctatgaatattgcaggcaaaggaact
ggggaaggagatacaggttcagtaggaatctacaaactgaatggaacaggaactataaca
actgcaggaaatggctggacaataggaaataatggatatgggatctttatgaagcaggaa
aaaggacaaatagctacaatcaataatggtgctgatatgaatctgggaacagcagcagta
ggaatctattcaagtggagtaaatacagtaaataatagtggaacaataactgtaggagaa
acagatacaaaaggagaccctaataaaactcaagaccatttaaactcagtaggtatatat
gtgacaaatggaactacagtaaataatactggaactatagatgtaaagcatgatttttca
gtaggtatttatggaagtggagagggaacacatattacaaatgcattaggggcaactatc
aatgttgataaaggtggagtaggaatccttgtacaaaataaagcaatagctgtaaataaa
gggactatcaatttaggaagtatagagagtccttatacaacaacagtaggaatggcagca
tattcaggagcatcaataatcaatgcttttggtgcagttattaaagtaggagaaggttca
ggaatggtagtaggagtaggtgcaactcttacaaataatggaaaaatagaggtaacaaat
ggagtaggaatccaaggtggaggacagattctaaatcaaggagatattactattcaacca
ggaggatcaggaatacaggttggaaatacaggagtaggaagtgcagaagtaggaagtatc
aaaatagactcagagggaaatgtaactattaatgataaatatgtaggtattggaggatca
ctttcagtagaaggaaatctaataataaatggagcatatgtagatgtaacaactaatact
cctatattcaatgcaaatagtgtaagtggagaagtaaatatacttccaaattttgcactg
acaggaaatggaattacatataaaattgaagattttgtaaatgtagcaatgggaacaata
acaggaaataaacttacaccagtaacatcaccactatttattgcaaaagtaacagaggat
ggagatcttgttattgcaaaaagaccatatgcagatctgacaataggagaacagttcgat
gcactggataaaggactggataatattcttgccaacagtaatggaataggaaaagatgcg
gatatattaaaaggattaaatgcttaccttgaaggattaccagataaccagtttgaagga
gaaacatctagaaaacttgcagaaacaagaggagatatctattcaactattcaaggaaga
atgcaggatatcaacagagcttttgataactctttctatgagcttgaatcatcatacaat
ctgactaaagacagcagtaagtatagtgtaatctatactgatggagactacaaggatcca
actttaggaatagaagactatgattacaagataatgggtgttctttacatgaaggagaaa
gagggaacagaatatggaagcaaatatggatatacactaggatttacaggatcaaaattt
gattttgaaaataattcaaaagaggatgtatattcattgagagcaggagtacacagagtt
aaaaatctaagtgaagaacataaagtatcatggctgtcaagaatagaactaggatacaac
agacacattgctaagagaaaacttaatctacatgaggtatttgagaataaaggagaatac
aatacatactctgtagcacttgacaacagacttacaaaggttatctatacagacctttcc
agacaattggatatatatgctgatttagatttagagtatggaaaagtagatggctttaca
gaaagcgcaggaagcaatggcggacttgaagtacagattaaagataatgactacttaagc
gcacagctgggagcaggagtaaaagcatcccaaagaatctatgcaggaaatgatatatcg
gtaaaagtaacagcagatgtaaagtatgcctatgaactaggagataactatgatggaaac
aaagcaagactaaaaaatggaggagaaggatactacagcctgattactccagatgaaaga
gaagggaaactgacaggaaaagtaggactgacagtggagaaagccaaccacatgggagta
acatttgaagtagaagcagcagatgaagaaagcagaaaagattcatcagtaaaatatgga
gtaagattcaattacaaattctag
DBGET
integrated database retrieval system
